Prdm5 (Mus musculus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSMUSG00000029913 T101088_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Prdm5
M08986_2.00
Mus musculus
DCCHBSHBCTCCHKB

VMDGGAGVDSVDGGH
Misc
Kulakovskiy et al.(2013)
PRDM5_MOUSE.H11MO.0.A
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000031973 C2H2 ZF 105 127
ENSMUSP00000031973 C2H2 ZF 133 155
ENSMUSP00000031973 C2H2 ZF 161 183
ENSMUSP00000031973 C2H2 ZF 189 211
ENSMUSP00000031973 C2H2 ZF 217 240
ENSMUSP00000031973 C2H2 ZF 246 268
ENSMUSP00000031973 C2H2 ZF 274 296
ENSMUSP00000031973 C2H2 ZF 302 324
ENSMUSP00000031973 C2H2 ZF 330 352
ENSMUSP00000031973 C2H2 ZF 358 380
ENSMUSP00000031973 C2H2 ZF 388 410
ENSMUSP00000031976 C2H2 ZF 167 190
ENSMUSP00000031976 C2H2 ZF 199 221
ENSMUSP00000031976 C2H2 ZF 231 256
ENSMUSP00000031976 C2H2 ZF 264 286
ENSMUSP00000031976 C2H2 ZF 289 311
ENSMUSP00000031976 C2H2 ZF 317 339
ENSMUSP00000031976 C2H2 ZF 345 367
ENSMUSP00000031976 C2H2 ZF 373 395
ENSMUSP00000031976 C2H2 ZF 401 424
ENSMUSP00000031976 C2H2 ZF 430 452
ENSMUSP00000031976 C2H2 ZF 458 480
ENSMUSP00000031976 C2H2 ZF 486 508
ENSMUSP00000031976 C2H2 ZF 514 536
ENSMUSP00000031976 C2H2 ZF 542 564
ENSMUSP00000031976 C2H2 ZF 572 594
ENSMUSP00000079979 C2H2 ZF 80 102
ENSMUSP00000079979 C2H2 ZF 108 130
ENSMUSP00000079979 C2H2 ZF 136 158
ENSMUSP00000079979 C2H2 ZF 164 186
ENSMUSP00000079979 C2H2 ZF 194 216
ENSMUSP00000133423 C2H2 ZF 167 190
ENSMUSP00000133423 C2H2 ZF 199 221
ENSMUSP00000133423 C2H2 ZF 231 256
ENSMUSP00000133423 C2H2 ZF 264 286
ENSMUSP00000133423 C2H2 ZF 289 311
ENSMUSP00000133423 C2H2 ZF 317 339
ENSMUSP00000133423 C2H2 ZF 345 367
ENSMUSP00000133423 C2H2 ZF 373 395
ENSMUSP00000133423 C2H2 ZF 401 424
ENSMUSP00000133423 C2H2 ZF 430 452
ENSMUSP00000133423 C2H2 ZF 458 480

Links

Other C2H2 ZF family TFs
Other Mus musculus TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Alligator_sinensis_CCG014866.1 Alligator sinensis Alligator_sinensis_CCG014866.1 N 0.780
PRDM5 Canis familiaris ENSCAFG00000004179 N 0.779
prdm5 Oryzias latipes ENSORLG00000016247 N 0.776
ENSAMXG00000000905 Astyanax mexicanus ENSAMXG00000000905 N 0.773
PRDM5 Loxodonta africana ENSLAFG00000006532 I 0.771
PRDM5 Pteropus vampyrus ENSPVAG00000012309 I 0.770
PRDM5 Homo sapiens ENSG00000138738 I 0.770
ENSCSAG00000003729 Chlorocebus sabaeus ENSCSAG00000003729 I 0.770
ENSNLEG00000009107 Nomascus leucogenys ENSNLEG00000009107 I 0.770
PRDM5 Callithrix jacchus ENSCJAG00000003133 I 0.766
prdm5 Takifugu rubripes ENSTRUG00000013850 N 0.765