CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Prdm5
(
Mus musculus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSMUSG00000029913
T101088_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Prdm5
M08986_2.00
Mus musculus
DCCHBSHBCTCCHKB
VMDGGAGVDSVDGGH
Misc
Kulakovskiy et al.(2013)
PRDM5_MOUSE.H11MO.0.A
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMUSP00000031973
C2H2 ZF
105
127
FDCQECMKKFISANQLKRHMITH
ENSMUSP00000031973
C2H2 ZF
133
155
YNCEICNKSFKRLDQVGAHKVIH
ENSMUSP00000031973
C2H2 ZF
161
183
YQCKLCGKGFAHRNVYKNHKKTH
ENSMUSP00000031973
C2H2 ZF
189
211
FQCDACKALFRTPFSLQRHLLIH
ENSMUSP00000031973
C2H2 ZF
217
240
FKCHHCDATFKRKDTLNVHVQVVH
ENSMUSP00000031973
C2H2 ZF
246
268
YRCELCNKAFVTPSVLRSHKKTH
ENSMUSP00000031973
C2H2 ZF
274
296
KVCPYCGQKFASSGTLRVHIRSH
ENSMUSP00000031973
C2H2 ZF
302
324
YQCPYCEKGFSKNDGLKMHIRTH
ENSMUSP00000031973
C2H2 ZF
330
352
YQCSECSKAFSQKRGLDEHKRTH
ENSMUSP00000031973
C2H2 ZF
358
380
FQCDVCDLAFSLKKMLIRHKMTH
ENSMUSP00000031973
C2H2 ZF
388
410
ECHFCHKKFTRNDYLKVHMDNIH
ENSMUSP00000031976
C2H2 ZF
167
190
FACPQCESSFPSEEVLTEHLQSLH
ENSMUSP00000031976
C2H2 ZF
199
221
FKCENCGKKFPVRQALQRHFEQH
ENSMUSP00000031976
C2H2 ZF
231
256
FVCKADSCGKRLKSKDALRRHQENVH
ENSMUSP00000031976
C2H2 ZF
264
286
LICSVCNRKCTSVSSLQEHRKIH
ENSMUSP00000031976
C2H2 ZF
289
311
FDCQECMKKFISANQLKRHMITH
ENSMUSP00000031976
C2H2 ZF
317
339
YNCEICNKSFKRLDQVGAHKVIH
ENSMUSP00000031976
C2H2 ZF
345
367
YQCKLCGKGFAHRNVYKNHKKTH
ENSMUSP00000031976
C2H2 ZF
373
395
FQCDACKALFRTPFSLQRHLLIH
ENSMUSP00000031976
C2H2 ZF
401
424
FKCHHCDATFKRKDTLNVHVQVVH
ENSMUSP00000031976
C2H2 ZF
430
452
YRCELCNKAFVTPSVLRSHKKTH
ENSMUSP00000031976
C2H2 ZF
458
480
KVCPYCGQKFASSGTLRVHIRSH
ENSMUSP00000031976
C2H2 ZF
486
508
YQCPYCEKGFSKNDGLKMHIRTH
ENSMUSP00000031976
C2H2 ZF
514
536
YQCSECSKAFSQKRGLDEHKRTH
ENSMUSP00000031976
C2H2 ZF
542
564
FQCDVCDLAFSLKKMLIRHKMTH
ENSMUSP00000031976
C2H2 ZF
572
594
ECHFCHKKFTRNDYLKVHMDNIH
ENSMUSP00000079979
C2H2 ZF
80
102
KVCPYCGQKFASSGTLRVHIRSH
ENSMUSP00000079979
C2H2 ZF
108
130
YQCPYCEKGFSKNDGLKMHIRTH
ENSMUSP00000079979
C2H2 ZF
136
158
YQCSECSKAFSQKRGLDEHKRTH
ENSMUSP00000079979
C2H2 ZF
164
186
FQCDVCDLAFSLKKMLIRHKMTH
ENSMUSP00000079979
C2H2 ZF
194
216
ECHFCHKKFTRNDYLKVHMDNIH
ENSMUSP00000133423
C2H2 ZF
167
190
FACPQCESSFPSEEVLTEHLQSLH
ENSMUSP00000133423
C2H2 ZF
199
221
FKCENCGKKFPVRQALQRHFEQH
ENSMUSP00000133423
C2H2 ZF
231
256
FVCKADSCGKRLKSKDALRRHQENVH
ENSMUSP00000133423
C2H2 ZF
264
286
LICSVCNRKCTSVSSLQEHRKIH
ENSMUSP00000133423
C2H2 ZF
289
311
FDCQECMKKFISANQLKRHMITH
ENSMUSP00000133423
C2H2 ZF
317
339
YNCEICNKSFKRLDQVGAHKVIH
ENSMUSP00000133423
C2H2 ZF
345
367
YQCKLCGKGFAHRNVYKNHKKTH
ENSMUSP00000133423
C2H2 ZF
373
395
FQCDACKALFRTPFSLQRHLLIH
ENSMUSP00000133423
C2H2 ZF
401
424
FKCHHCDATFKRKDTLNVHVQVVH
ENSMUSP00000133423
C2H2 ZF
430
452
YRCELCNKAFVTPSVLRSHKKTH
ENSMUSP00000133423
C2H2 ZF
458
480
KVCPYCGQKFASSGTLRVHIRSH
Links
Other
C2H2 ZF
family TFs
Other
Mus musculus
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy