CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Zic5
(
Mus musculus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSMUSG00000041703
T101168_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Zic5
M00780_2.00
Mus musculus
BRCCCCCYDS
SHRGGGGGYV
PBM
Weirauch et al.(2013)
pTH2818
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M00780_2.00
C2H2 ZF
16
34
CSKTFGTMHELVNHVTVEH
M00780_2.00
C2H2 ZF
43
70
HICFWEDCPREGKPFKAKYKLINHIRVH
M00780_2.00
C2H2 ZF
76
100
FPCPFPGCGKVFARSENLKIHKRTH
M00780_2.00
C2H2 ZF
106
130
FKCEFDGCDRKFANSSDRKKHSHVH
M00780_2.00
C2H2 ZF
136
160
YYCKIRGCDKSYTHPSSLRKHMKIH
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMUSP00000035754
C2H2 ZF
390
408
CSKTFGTMHELVNHVTVEH
ENSMUSP00000035754
C2H2 ZF
450
474
FPCPFPGCGKVFARSENLKIHKRTH
ENSMUSP00000035754
C2H2 ZF
480
504
FKCEFDGCDRKFANSSDRKKHSHVH
ENSMUSP00000035754
C2H2 ZF
510
534
YYCKIRGCDKSYTHPSSLRKHMKIH
Links
Other
C2H2 ZF
family TFs
Other
Mus musculus
TFs
0 Related TFs
">No related TF found