TF Information

Snai1 *(Mus musculus)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00096 (zf-C2H2)	IPR007087	ENSMUSG00000042821	T101176_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Snai1 M00781_2.00	Mus musculus	NNNTGTCANN	NNTGACANNN	PBM Weirauch et al.(2013) pTH2340	(Direct)	(Direct)
Snai1 M09002_2.00	Mus musculus	VCACCTGB	VCAGGTGB	Misc Kulakovskiy et al.(2013) SNAI1_MOUSE.H11MO.0.C	(Direct)	(Direct)
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
SNAI1 M04441_2.00	Homo sapiens	NVCACCTGYN	NRCAGGTGBN	SELEX Yin et al.(2017) SNAI1_eDBD_HT-SELEX	0.822	0.967
SNAI1 M04443_2.00	Homo sapiens	TRCACCTGYN	NRCAGGTGYA	SELEX Yin et al.(2017) SNAI1_FL_HT-SELEX	0.822	0.967
SNAI1 M08303_2.00	Homo sapiens	NNNNGCACCTGCYNB	VNRGCAGGTGCNNNN	ChIP-seq Schmitges et al.(2016) O95863.MEME	0.822	0.967
SNAI1 M08886_2.00	Homo sapiens	VCACCTGB	VCAGGTGB	Misc Kulakovskiy et al.(2013) SNAI1_HUMAN.H11MO.0.C	0.822	0.967
SNAI1 M10201_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SNA_Q4	0.822	0.967
SNAI1 M10202_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SNA_Q6	0.822	0.967
SNAI1 M04442_2.00	Homo sapiens	NRCACCTGYN	NRCAGGTGYN	SELEX Yin et al.(2017) SNAI1_eDBD_Methyl-HT-SELEX	0.822	0.967
SNAI1 M04444_2.00	Homo sapiens	YRCACCTGYN	NRCAGGTGYR	SELEX Yin et al.(2017) SNAI1_FL_Methyl-HT-SELEX	0.822	0.967
For this family, TFs with SR scores > 0.755* will likely have a similar motif*

Experimental Constructs

Motif ID	Domain	From	To	Sequence
M00781_2.00	C2H2 ZF	16	38	FNCKYCNKEYLSLGALKMHIRSH
M00781_2.00	C2H2 ZF	42	64	CVCTTCGKAFSRPWLLQGHVRTH
M00781_2.00	C2H2 ZF	70	92	FSCSHCNRAFADRSNLRAHLQTH
M00781_2.00	C2H2 ZF	98	119	YQCQACARTFSRMSLLHKHQES

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSMUSP00000050581	C2H2 ZF	154	176	FNCKYCNKEYLSLGALKMHIRSH
ENSMUSP00000050581	C2H2 ZF	180	202	CVCTTCGKAFSRPWLLQGHVRTH
ENSMUSP00000050581	C2H2 ZF	208	230	FSCSHCNRAFADRSNLRAHLQTH
ENSMUSP00000050581	C2H2 ZF	236	257	YQCQACARTFSRMSLLHKHQES

Links
Other C2H2 ZF family TFs
Other *Mus musculus* TFs

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46 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action