CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Zfp1
(
Mus musculus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSMUSG00000055835
T101318_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Zfp1
M10357_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZFP1_02
(Direct)
(Direct)
Zfp1
M10358_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZFP1_03
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZFP1
M04601_2.00
Homo sapiens
NTWYYATACCYWGCH
DGCWRGGTATRRWAN
SELEX
Yin et al.(2017)
ZFP1_eDBD_HT-SELEX
0.806
0.951
ZFP1
M05854_2.00
Homo sapiens
CCWRCHMAACTAWCC
GGWTAGTTKDGYWGG
SMiLE-seq
Isakova et al.(2017)
ZFP1_1
0.806
0.951
ZFP1
M05855_2.00
Homo sapiens
NTDYBATACCCANHH
DDNTGGGTATVRHAN
SMiLE-seq
Isakova et al.(2017)
ZFP1_2
0.806
0.951
ZFP1
M07670_2.00
Homo sapiens
YNMNTWTTATACCCARCCCWNMTRKCCM
KGGMYAKNWGGGYTGGGTATAAWANKNR
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZFP1.MEME.OriginalMapping
0.806
0.951
ZFP1
M04602_2.00
Homo sapiens
NTWYYATACCYWRCH
DGYWRGGTATRRWAN
SELEX
Yin et al.(2017)
ZFP1_eDBD_Methyl-HT-SELEX
0.806
0.951
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMUSP00000076964
C2H2 ZF
183
205
FVCNYCDKTFSFKSLLVSHKRIH
ENSMUSP00000076964
C2H2 ZF
211
233
YECDVCQKTFSHKANLIKHQRIH
ENSMUSP00000076964
C2H2 ZF
239
261
FECPECGKAFTHQSNLIVHQRAH
ENSMUSP00000076964
C2H2 ZF
267
289
YGCSECGKTFAQKFELTTHQRIH
ENSMUSP00000076964
C2H2 ZF
295
317
YECNECAKTFFKKSNLIIHQKIH
ENSMUSP00000076964
C2H2 ZF
323
345
YECSECGKSFIQNSQLIIHRRTH
ENSMUSP00000076964
C2H2 ZF
351
373
YECTECGKTFSQRSTLRLHLRIH
ENSMUSP00000076964
C2H2 ZF
379
401
YECAECGKAFSRKSRLSVHQRVH
Links
Other
C2H2 ZF
family TFs
Other
Mus musculus
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy