CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Zkscan5
(
Mus musculus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSMUSG00000055991
T101319_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Zkscan5
M00785_2.00
Mus musculus
NWYDHBDNHN
NDNHVDHRWN
PBM
Weirauch et al.(2013)
pTH2283
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZKSCAN5
M07709_2.00
Homo sapiens
TCACCTCCN
NGGAGGTGA
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZKSCAN5.RCADE.OriginalMapping
0.808
0.942
For this family, TFs with SR scores >
0.755
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M00785_2.00
C2H2 ZF
16
38
HRCGDCGKFFLQASNFIQHRRIH
M00785_2.00
C2H2 ZF
44
66
FKCGECGKSYNQRVHLTQHQRVH
M00785_2.00
C2H2 ZF
72
94
YKCQVCGKAFRVSSHLVQHHSVH
M00785_2.00
C2H2 ZF
100
122
YGCNECGKSFGRHSHLIEHLKRH
M00785_2.00
C2H2 ZF
215
237
HQCNECGKSFIQSAHLIQHRRIH
M00785_2.00
C2H2 ZF
243
265
FRCEECGKSYNQRVHLTQHHRVH
M00785_2.00
C2H2 ZF
271
293
YACHLCGKAFRVRSHLVQHQSVH
M00785_2.00
C2H2 ZF
299
321
FKCNECGKGFGRRSHLAGHLRLH
M00785_2.00
C2H2 ZF
327
349
HQCHECGEIFFQYVSLLEHQVLH
M00785_2.00
C2H2 ZF
383
405
YQCDSCGKAFSYSSDLIQHYRTH
M00785_2.00
C2H2 ZF
439
461
HQCNECGRGFSLKSHLSQHQRIH
M00785_2.00
C2H2 ZF
467
489
LQCKECGMSFSWSCSLFKHLRSH
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMUSP00000031601
C2H2 ZF
268
290
HRCGDCGKFFLQASNFIQHRRIH
ENSMUSP00000031601
C2H2 ZF
296
318
FKCGECGKSYNQRVHLTQHQRVH
ENSMUSP00000031601
C2H2 ZF
324
346
YKCQVCGKAFRVSSHLVQHHSVH
ENSMUSP00000031601
C2H2 ZF
352
374
YGCNECGKSFGRHSHLIEHLKRH
ENSMUSP00000031601
C2H2 ZF
467
489
HQCNECGKSFIQSAHLIQHRRIH
ENSMUSP00000031601
C2H2 ZF
495
517
FRCEECGKSYNQRVHLTQHHRVH
ENSMUSP00000031601
C2H2 ZF
523
545
YACHLCGKAFRVRSHLVQHQSVH
ENSMUSP00000031601
C2H2 ZF
551
573
FKCNECGKGFGRRSHLAGHLRLH
ENSMUSP00000031601
C2H2 ZF
579
601
HQCHECGEIFFQYVSLLEHQVLH
ENSMUSP00000031601
C2H2 ZF
635
657
YQCDSCGKAFSYSSDLIQHYRTH
ENSMUSP00000031601
C2H2 ZF
691
713
HQCNECGRGFSLKSHLSQHQRIH
ENSMUSP00000031601
C2H2 ZF
719
741
LQCKECGMSFSWSCSLFKHLRSH
ENSMUSP00000082814
C2H2 ZF
341
363
HRCGDCGKFFLQASNFIQHRRIH
ENSMUSP00000082814
C2H2 ZF
369
391
FKCGECGKSYNQRVHLTQHQRVH
ENSMUSP00000082814
C2H2 ZF
397
419
YKCQVCGKAFRVSSHLVQHHSVH
ENSMUSP00000082814
C2H2 ZF
425
447
YGCNECGKSFGRHSHLIEHLKRH
ENSMUSP00000082814
C2H2 ZF
540
562
HQCNECGKSFIQSAHLIQHRRIH
ENSMUSP00000082814
C2H2 ZF
568
590
FRCEECGKSYNQRVHLTQHHRVH
ENSMUSP00000082814
C2H2 ZF
596
618
YACHLCGKAFRVRSHLVQHQSVH
ENSMUSP00000082814
C2H2 ZF
624
646
FKCNECGKGFGRRSHLAGHLRLH
ENSMUSP00000082814
C2H2 ZF
652
674
HQCHECGEIFFQYVSLLEHQVLH
ENSMUSP00000082814
C2H2 ZF
708
730
YQCDSCGKAFSYSSDLIQHYRTH
ENSMUSP00000082814
C2H2 ZF
764
786
HQCNECGRGFSLKSHLSQHQRIH
ENSMUSP00000082814
C2H2 ZF
792
814
LQCKECGMSFSWSCSLFKHLRSH
Links
Other
C2H2 ZF
family TFs
Other
Mus musculus
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy