Zkscan5 (Mus musculus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSMUSG00000055991 T101319_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Zkscan5
M00785_2.00		 Mus musculus
NWYDHBDNHN
NDNHVDHRWN		 PBM
Weirauch et al.(2013)
pTH2283		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZKSCAN5
M07709_2.00 		Homo sapiens
TCACCTCCN
NGGAGGTGA		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZKSCAN5.RCADE.OriginalMapping 		0.808 0.942
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00785_2.00 C2H2 ZF 16 38
M00785_2.00 C2H2 ZF 44 66
M00785_2.00 C2H2 ZF 72 94
M00785_2.00 C2H2 ZF 100 122
M00785_2.00 C2H2 ZF 215 237
M00785_2.00 C2H2 ZF 243 265
M00785_2.00 C2H2 ZF 271 293
M00785_2.00 C2H2 ZF 299 321
M00785_2.00 C2H2 ZF 327 349
M00785_2.00 C2H2 ZF 383 405
M00785_2.00 C2H2 ZF 439 461
M00785_2.00 C2H2 ZF 467 489

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000031601 C2H2 ZF 268 290
ENSMUSP00000031601 C2H2 ZF 296 318
ENSMUSP00000031601 C2H2 ZF 324 346
ENSMUSP00000031601 C2H2 ZF 352 374
ENSMUSP00000031601 C2H2 ZF 467 489
ENSMUSP00000031601 C2H2 ZF 495 517
ENSMUSP00000031601 C2H2 ZF 523 545
ENSMUSP00000031601 C2H2 ZF 551 573
ENSMUSP00000031601 C2H2 ZF 579 601
ENSMUSP00000031601 C2H2 ZF 635 657
ENSMUSP00000031601 C2H2 ZF 691 713
ENSMUSP00000031601 C2H2 ZF 719 741
ENSMUSP00000082814 C2H2 ZF 341 363
ENSMUSP00000082814 C2H2 ZF 369 391
ENSMUSP00000082814 C2H2 ZF 397 419
ENSMUSP00000082814 C2H2 ZF 425 447
ENSMUSP00000082814 C2H2 ZF 540 562
ENSMUSP00000082814 C2H2 ZF 568 590
ENSMUSP00000082814 C2H2 ZF 596 618
ENSMUSP00000082814 C2H2 ZF 624 646
ENSMUSP00000082814 C2H2 ZF 652 674
ENSMUSP00000082814 C2H2 ZF 708 730
ENSMUSP00000082814 C2H2 ZF 764 786
ENSMUSP00000082814 C2H2 ZF 792 814

Links

Other C2H2 ZF family TFs
Other Mus musculus TFs

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22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action