CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Rbak
(
Mus musculus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSMUSG00000061898
T101374_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleoplasm. Predicted to be active in nucleus. Is expressed in early conceptus and genitourinary system. Orthologous to several human genes including RBAK-RBAKDN (RBAK-RBAKDN readthrough). [provided by Alliance of Genome Resources, Apr 2022]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RBAK
M07595_2.00
Homo sapiens
BSYYBYTYSTYHCBN
NVGDRASRARVRRSV
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
RBAK.RCADE.ReprocessedData
0.770
0.930
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMUSP00000059273
C2H2 ZF
258
280
FECTQCGKSFCKKSKFIIHQRAH
ENSMUSP00000059273
C2H2 ZF
286
308
YACSVCGKSFSQKGTLTVHRRSH
ENSMUSP00000059273
C2H2 ZF
314
336
YKCNECGKTFCQKLHLTQHQRTH
ENSMUSP00000059273
C2H2 ZF
342
364
YECSECGKSFCQKTHLTLHQRNH
ENSMUSP00000059273
C2H2 ZF
370
392
YPCNECGKSFSRKSALNDHQRTH
ENSMUSP00000059273
C2H2 ZF
398
420
YKCNECGKSYYRKSTLITHQRTH
ENSMUSP00000059273
C2H2 ZF
426
448
YQCSECGKFFSRVSYLTIHYRSH
ENSMUSP00000059273
C2H2 ZF
454
476
YECTECGKTFNLNSAFIRHWKVH
ENSMUSP00000059273
C2H2 ZF
508
529
YECNECGKTFLDSSAFHRHQSV
ENSMUSP00000059273
C2H2 ZF
536
558
YECNICGKSFSDSSCYTVHYRGH
ENSMUSP00000059273
C2H2 ZF
564
586
FGCSECGKTFSHNSSLFRHQRVH
ENSMUSP00000059273
C2H2 ZF
592
614
YECYECGKFFSQKSYLTIHHRIH
ENSMUSP00000059273
C2H2 ZF
620
642
YECSKCGKVFSRMSNLTVHYRSH
ENSMUSP00000059273
C2H2 ZF
648
670
YECNECGKVFSQKSYLTVHYRTH
ENSMUSP00000059273
C2H2 ZF
676
698
YECNECGKKFHHRSAFNSHQRIH
ENSMUSP00000128731
C2H2 ZF
258
280
FECTQCGKSFCKKSKFIIHQRAH
ENSMUSP00000128731
C2H2 ZF
286
308
YACSVCGKSFSQKGTLTVHRRSH
ENSMUSP00000128731
C2H2 ZF
314
336
YKCNECGKTFCQKLHLTQHQRTH
ENSMUSP00000128731
C2H2 ZF
342
364
YECSECGKSFCQKTHLTLHQRNH
ENSMUSP00000128731
C2H2 ZF
370
392
YPCNECGKSFSRKSALNDHQRTH
ENSMUSP00000128731
C2H2 ZF
398
420
YKCNECGKSYYRKSTLITHQRTH
ENSMUSP00000128731
C2H2 ZF
426
448
YQCSECGKFFSRVSYLTIHYRSH
ENSMUSP00000128731
C2H2 ZF
454
476
YECTECGKTFNLNSAFIRHWKVH
ENSMUSP00000128731
C2H2 ZF
508
529
YECNECGKTFLDSSAFHRHQSV
ENSMUSP00000128731
C2H2 ZF
536
558
YECNICGKSFSDSSCYTVHYRGH
ENSMUSP00000128731
C2H2 ZF
564
586
FGCSECGKTFSHNSSLFRHQRVH
ENSMUSP00000128731
C2H2 ZF
592
614
YECYECGKFFSQKSYLTIHHRIH
ENSMUSP00000128731
C2H2 ZF
620
642
YECSKCGKVFSRMSNLTVHYRSH
ENSMUSP00000128731
C2H2 ZF
648
670
YECNECGKVFSQKSYLTVHYRTH
ENSMUSP00000128731
C2H2 ZF
676
698
YECNECGKKFHHRSAFNSHQRIH
Links
Other
C2H2 ZF
family TFs
Other
Mus musculus
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy