CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Zbtb6
(
Mus musculus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSMUSG00000066798
T101408_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription repressor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in mitochondrion. Predicted to be active in nucleoplasm. Is expressed in several structures, including bladder; nervous system; and retina. Orthologous to human ZBTB6 (zinc finger and BTB domain containing 6). [provided by Alliance of Genome Resources, Apr 2022]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZBTB6
M08364_2.00
Homo sapiens
SBNGCTCCAKVDYCN
NGRHBMTGGAGCNVS
ChIP-seq
Schmitges et al.(2016)
Q15916.MEME
0.827
1.000
ZBTB6
M08940_2.00
Homo sapiens
NRGCTCCAKCDYC
GRHGMTGGAGCYN
Misc
Kulakovskiy et al.(2013)
ZBTB6_HUMAN.H11MO.0.C
0.827
1.000
ZBTB6
M10307_2.00
Homo sapiens
BGGCTCYAKSRYC
GRYSMTRGAGCCV
Transfac
Matys et al.(2006)
V$ZID_01
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMUSP00000056100
C2H2 ZF
300
322
HQCPRCPRGFLHVENYLRHLKMH
ENSMUSP00000056100
C2H2 ZF
325
347
FLCLQCGKTFTQKKNLNRHIRGH
ENSMUSP00000056100
C2H2 ZF
353
375
FQCTVCLKTFTAKSTLQDHLNIH
ENSMUSP00000056100
C2H2 ZF
381
404
YKCHCCDMDFKHKSALKKHLTSVH
ENSMUSP00000108554
C2H2 ZF
300
322
HQCPRCPRGFLHVENYLRHLKMH
ENSMUSP00000108554
C2H2 ZF
325
347
FLCLQCGKTFTQKKNLNRHIRGH
ENSMUSP00000108554
C2H2 ZF
353
375
FQCTVCLKTFTAKSTLQDHLNIH
ENSMUSP00000108554
C2H2 ZF
381
404
YKCHCCDMDFKHKSALKKHLTSVH
Links
Other
C2H2 ZF
family TFs
Other
Mus musculus
TFs
50 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy