Prdm6 (Mus musculus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSMUSG00000069378 T101433_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PRDM6
M08277_2.00 		Homo sapiens
TTTTYYWBHHTTTYYHYTBYN
NRVARDRRAAADDVWRRAAAA		 ChIP-seq
Schmitges et al.(2016)
Q9NQX0.MEME 		0.827 1.000
PRDM6
M08855_2.00 		Homo sapiens
NNKTTTTCYYBYB
VRVRRGAAAAMNN		 Misc
Kulakovskiy et al.(2013)
PRDM6_HUMAN.H11MO.0.C 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000089513 C2H2 ZF 474 495
ENSMUSP00000089513 C2H2 ZF 502 524
ENSMUSP00000089513 C2H2 ZF 530 552
ENSMUSP00000089513 C2H2 ZF 558 579
ENSMUSP00000111056 C2H2 ZF 82 103
ENSMUSP00000111056 C2H2 ZF 110 132
ENSMUSP00000111056 C2H2 ZF 138 160
ENSMUSP00000111056 C2H2 ZF 166 187
ENSMUSP00000111057 C2H2 ZF 273 294
ENSMUSP00000111057 C2H2 ZF 301 323
ENSMUSP00000111057 C2H2 ZF 329 351
ENSMUSP00000111057 C2H2 ZF 357 378
ENSMUSP00000114644 C2H2 ZF 313 334
ENSMUSP00000114644 C2H2 ZF 341 363
ENSMUSP00000114644 C2H2 ZF 369 391
ENSMUSP00000114644 C2H2 ZF 397 418

Links

Other C2H2 ZF family TFs
Other Mus musculus TFs

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52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action