CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Zfp558
(
Mus musculus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSMUSG00000074500
T101480_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF558
M07620_2.00
Homo sapiens
HKGRAYHTGTRGRTKBATRYCTTYCAK
MTGRAAGRYATVMAYCYACADRTYCMD
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF558.RCADE.ReprocessedData
0.788
0.917
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMUSP00000132305
C2H2 ZF
157
178
ECNQCFKVFSTKSNLTQHKRIH
ENSMUSP00000132305
C2H2 ZF
184
206
YDCTQCGKSFRSKSYLTVHRRIH
ENSMUSP00000132305
C2H2 ZF
212
234
FECNHCGKAFSDPSSLRLHVRIH
ENSMUSP00000132305
C2H2 ZF
240
262
YECSQCFHVFRTSCNLKSHKRIH
ENSMUSP00000132305
C2H2 ZF
269
291
HECSQCGKAFSTRSSLTGHNSIH
ENSMUSP00000132305
C2H2 ZF
297
319
FECQECGKTFRKSSYLTQHLRTH
ENSMUSP00000132305
C2H2 ZF
325
347
YECNECGKSFSSSFSLTVHKRIH
ENSMUSP00000132305
C2H2 ZF
353
375
YECSHCGKAFNNLSAVKKHLMTH
ENSMUSP00000132305
C2H2 ZF
381
403
YGCNHCGKSFTSNSYLSVHKRVH
Links
Other
C2H2 ZF
family TFs
Other
Mus musculus
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy