Zscan4d (Mus musculus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSMUSG00000090714 T101558_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in chromosome, telomeric region and nucleus. Orthologous to human ZSCAN4 (zinc finger and SCAN domain containing 4). [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Zscan4c
M00147_2.00 		Mus musculus
NNTGTGCNN
NNGCACANN		 PBM
Badis et al.(2009)
Gm397_1753 		0.827 0.989
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000066504 C2H2 ZF 395 417
ENSMUSP00000066504 C2H2 ZF 425 446
ENSMUSP00000066504 C2H2 ZF 452 474
ENSMUSP00000066504 C2H2 ZF 480 503
ENSMUSP00000131258 C2H2 ZF 395 417
ENSMUSP00000131258 C2H2 ZF 425 446
ENSMUSP00000131258 C2H2 ZF 452 474
ENSMUSP00000131258 C2H2 ZF 480 503

Links

Other C2H2 ZF family TFs
Other Mus musculus TFs

Invalid Input OrderBy

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action