CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSNLEG00000010977
(
Nomascus leucogenys
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSNLEG00000010977
T101985_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF550
M07772_2.00
Homo sapiens
TGCCYTAGCMBWSRYTYY
RRARYSWVKGCTARGGCA
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF550.RCADE.OriginalMapping
0.827
0.989
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSNLEP00000013324
C2H2 ZF
202
224
YKCKQCGKGFNRKWYLVRHQRVH
ENSNLEP00000013324
C2H2 ZF
230
252
YECNACGKAFSQSSTLIRHYLIH
ENSNLEP00000013324
C2H2 ZF
258
280
YKCLECGKAFKRRSYLMQHHPIH
ENSNLEP00000013324
C2H2 ZF
286
308
YECSQCRKAFTHRSTFIRHNRTH
ENSNLEP00000013324
C2H2 ZF
314
336
FECKECEKAFSNRAHLIQHYIIH
ENSNLEP00000013324
C2H2 ZF
342
364
YDCMACGKAFRCSSELIQHQRIH
ENSNLEP00000013324
C2H2 ZF
370
392
YECTQCGKAFHRSTYLIQHSVIH
ENSNLEP00000013324
C2H2 ZF
398
420
YKCIECGKEFHRRSHLLQHQRVH
Links
Other
C2H2 ZF
family TFs
Other
Nomascus leucogenys
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZNF550
Gorilla gorilla
ENSGGOG00000014068
I
0.827
ZNF550
Pan troglodytes
ENSPTRG00000011560
I
0.827
ENSMMUP00000031401
Macaca fascicularis
ENSMMUP00000031401
I
0.827
ZNF550
Homo sapiens
ENSG00000251369
D
0.827
ZNF550
Macaca mulatta
ENSMMUG00000006122
I
0.827
ENSCSAG00000001629
Chlorocebus sabaeus
ENSCSAG00000001629
I
0.827
ENSTSYG00000004591
Tarsius syrichta
ENSTSYG00000004591
I
0.819
ENSAMEG00000004910
Ailuropoda melanoleuca
ENSAMEG00000004910
I
0.817
ZNF550
Canis familiaris
ENSCAFG00000002421
I
0.817
ZNF550
Callithrix jacchus
ENSCJAG00000000044
I
0.816
ENSMPUG00000006298
Mustela putorius furo
ENSMPUG00000006298
I
0.812
ZNF550
Tursiops truncatus
ENSTTRG00000000293
I
0.800
ENSOARG00000003673
Ovis aries
ENSOARG00000003673
I
0.784