CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSNLEG00000010977
(
Nomascus leucogenys
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSNLEG00000010977
T101985_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF550
M07772_2.00
Homo sapiens
TGCCYTAGCMBWSRYTYY
RRARYSWVKGCTARGGCA
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF550.RCADE.OriginalMapping
0.827
0.989
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSNLEP00000013324
C2H2 ZF
202
224
YKCKQCGKGFNRKWYLVRHQRVH
ENSNLEP00000013324
C2H2 ZF
230
252
YECNACGKAFSQSSTLIRHYLIH
ENSNLEP00000013324
C2H2 ZF
258
280
YKCLECGKAFKRRSYLMQHHPIH
ENSNLEP00000013324
C2H2 ZF
286
308
YECSQCRKAFTHRSTFIRHNRTH
ENSNLEP00000013324
C2H2 ZF
314
336
FECKECEKAFSNRAHLIQHYIIH
ENSNLEP00000013324
C2H2 ZF
342
364
YDCMACGKAFRCSSELIQHQRIH
ENSNLEP00000013324
C2H2 ZF
370
392
YECTQCGKAFHRSTYLIQHSVIH
ENSNLEP00000013324
C2H2 ZF
398
420
YKCIECGKEFHRRSHLLQHQRVH
Links
Other
C2H2 ZF
family TFs
Other
Nomascus leucogenys
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy