PATZ1 (Ornithorhynchus anatinus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSOANG00000014654 T102425_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PATZ1
M08287_2.00
Homo sapiens
CCCCDCCC

GGGHGGGG
ChIP-seq
Schmitges et al.(2016)
Q9HBE1.MEME
0.827 1.000
PATZ1
M08864_2.00
Homo sapiens
NYBCHNBYBCMKYCYCYBCCMY

RKGGVRGRGRMKGVRVNDGVRN
Misc
Kulakovskiy et al.(2013)
PATZ1_HUMAN.H11MO.0.C
0.827 1.000
PATZ1
M10137_2.00
Homo sapiens
NDDCCCCCCCCSH

DSGGGGGGGGHHN
Transfac
Matys et al.(2006)
V$MAZR_01
0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOANP00000023088 C2H2 ZF 290 312
ENSOANP00000023088 C2H2 ZF 354 375
ENSOANP00000023088 C2H2 ZF 381 403
ENSOANP00000023088 C2H2 ZF 411 434
ENSOANP00000023088 C2H2 ZF 440 462
ENSOANP00000023088 C2H2 ZF 494 516

Links

Other C2H2 ZF family TFs
Other Ornithorhynchus anatinus TFs

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36 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action