CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZKSCAN5
(
Oryctolagus cuniculus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSOCUG00000002447
T102938_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZKSCAN5
M07709_2.00
Homo sapiens
TCACCTCCN
NGGAGGTGA
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZKSCAN5.RCADE.OriginalMapping
0.811
0.957
Zkscan5
M00785_2.00
Mus musculus
NWYDHBDNHN
NDNHVDHRWN
PBM
Weirauch et al.(2013)
pTH2283
0.803
0.938
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOCUP00000002114
C2H2 ZF
346
368
HRCLDCGKFFLQASNFIQHRRIH
ENSOCUP00000002114
C2H2 ZF
374
396
FTCGECGKSYNQRVHLTQHQRVH
ENSOCUP00000002114
C2H2 ZF
402
424
YKCQVCGKAFRVSSHLVQHHSVH
ENSOCUP00000002114
C2H2 ZF
430
452
YGCNECGKNFGRHSHLIEHLKRH
ENSOCUP00000002114
C2H2 ZF
547
569
HKCNTCGKSFIQSAHLIQHQRIH
ENSOCUP00000002114
C2H2 ZF
575
597
FRCDECGKSYNQRVHLTQHQRVH
ENSOCUP00000002114
C2H2 ZF
603
625
YTCHLCGKAFRVRSHLVQHQSVH
ENSOCUP00000002114
C2H2 ZF
631
653
FKCNECGKGFGRRSHLAGHLRLH
ENSOCUP00000002114
C2H2 ZF
659
681
HQCHECGEIFFQYVSLIEHQVLH
ENSOCUP00000002114
C2H2 ZF
715
737
YKCDICGKTFGYSSDLIQHYRTH
ENSOCUP00000002114
C2H2 ZF
771
793
HQCDECGRGFTLKSHLSQHQRIH
ENSOCUP00000002114
C2H2 ZF
799
821
YQCKECGMSFSWSCSLFKHLRSH
ENSOCUP00000015697
C2H2 ZF
422
443
YKCDICGKTFGYSSDLIQHYKH
Links
Other
C2H2 ZF
family TFs
Other
Oryctolagus cuniculus
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy