CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PRDM12
(
Oryctolagus cuniculus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSOCUG00000008241
T103033_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PRDM12
M10213_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM12_01
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOCUP00000007120
C2H2 ZF
219
241
MRCVICHRGFNSRSNLRSHMRIH
ENSOCUP00000007120
C2H2 ZF
247
269
FVCRFCNRRFSQSSTLRNHVRLH
ENSOCUP00000007120
C2H2 ZF
275
296
YKCQVCQSAYSQLAGLRAHQKS
ENSOCUP00000024416
C2H2 ZF
249
271
MRCVICHRGFNSRSNLRSHMRIH
ENSOCUP00000024416
C2H2 ZF
277
299
FVCRFCNRRFSQSSTLRNHVRLH
ENSOCUP00000024416
C2H2 ZF
305
326
YKCQVCQSAYSQLAGLRAHQKS
Links
Other
C2H2 ZF
family TFs
Other
Oryctolagus cuniculus
TFs
56 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy