CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ZNF398
(
Oryctolagus cuniculus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSOCUG00000008416
T103034_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF398
M07716_2.00
Homo sapiens
CTSYYTCYYTCCCH
DGGGARRGARRSAG
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF398.ChIP-seq.ReprocessedData
0.825
0.984
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOCUP00000007269
C2H2 ZF
346
367
FSCHHCGKSLSQDMLLTHQCSH
ENSOCUP00000007269
C2H2 ZF
402
423
TCPHCARTFTHPSRLTYHLRVH
ENSOCUP00000007269
C2H2 ZF
430
452
FPCPDCPKRFADQARLTSHRRAH
ENSOCUP00000007269
C2H2 ZF
458
480
FRCTQCGRSFSLKISLLLHQRGH
ENSOCUP00000007269
C2H2 ZF
486
508
FSCPQCGIDFNGHSALIRHQMIH
ENSOCUP00000007269
C2H2 ZF
514
536
YPCTDCSKSFMRKEHLLNHRRLH
ENSOCUP00000007269
C2H2 ZF
542
564
FSCAHCGKSFIRKHHLMKHQRIH
ENSOCUP00000007269
C2H2 ZF
570
593
YPCSYCGRSFRYKQTLKDHLRSGH
ENSOCUP00000016401
C2H2 ZF
345
366
FSCHHCGKSLSQDMLLTHQCSH
ENSOCUP00000016401
C2H2 ZF
401
422
TCPHCARTFTHPSRLTYHLRVH
ENSOCUP00000016401
C2H2 ZF
429
451
FPCPDCPKRFADQARLTSHRRAH
ENSOCUP00000016401
C2H2 ZF
457
479
FRCTQCGRSFSLKISLLLHQRGH
ENSOCUP00000016401
C2H2 ZF
485
507
FSCPQCGIDFNGHSALIRHQMIH
ENSOCUP00000016401
C2H2 ZF
513
535
YPCTDCSKSFMRKEHLLNHRRLH
ENSOCUP00000016401
C2H2 ZF
541
563
FSCAHCGKSFIRKHHLMKHQRIH
ENSOCUP00000016401
C2H2 ZF
569
592
YPCSYCGRSFRYKQTLKDHLRSGH
Links
Other
C2H2 ZF
family TFs
Other
Oryctolagus cuniculus
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy