CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF12
(
Oryctolagus cuniculus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSOCUG00000008958
T103045_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF12
M04515_2.00
Homo sapiens
NVYGCKRTAACAARYAKSMCC
GGKSMTRYTTGTTAYMGCRBN
SELEX
Yin et al.(2017)
ZNF12_eDBD_HT-SELEX
0.819
0.980
ZNF12
M07611_2.00
Homo sapiens
BNYBYSTYNYNGCNGCNS
SNGCNGCNRNRASRVRNV
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF12.RCADE.OriginalMapping
0.819
0.980
ZNF12
M04516_2.00
Homo sapiens
NVYGCWRTAACGAGYABCMCC
GGKGVTRCTCGTTAYWGCRBN
SELEX
Yin et al.(2017)
ZNF12_eDBD_Methyl-HT-SELEX
0.819
0.980
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOCUP00000024850
C2H2 ZF
268
290
YECRECGKSFCKKSKFVIHQRTH
ENSOCUP00000024850
C2H2 ZF
296
318
YKCNQCGKSFCQKGTLTVHQRTH
ENSOCUP00000024850
C2H2 ZF
324
346
YECNECGKNFYQKLHLIQHLRTH
ENSOCUP00000024850
C2H2 ZF
352
374
YECSYCGKAFCQKTHLTQHQRTH
ENSOCUP00000024850
C2H2 ZF
380
402
YVCHDCGKTFSQKSALNDHQKIH
ENSOCUP00000024850
C2H2 ZF
408
430
YKCSECGKCFCRKSTLTTHLRTH
ENSOCUP00000024850
C2H2 ZF
436
458
YECNECGKFFSRLSYLTVHYRTH
ENSOCUP00000024850
C2H2 ZF
464
486
YECNDCGKTFYLNSALMRHQRVH
ENSOCUP00000024850
C2H2 ZF
492
514
YECNECGKLFSQLSYLTIHHRTH
ENSOCUP00000024850
C2H2 ZF
520
542
YECSECGKTFYQNSALCRHRRIH
ENSOCUP00000024850
C2H2 ZF
548
570
YECYVCGKFFSQMSYLTIHHRIH
ENSOCUP00000024850
C2H2 ZF
576
598
YECSECGKTFCQNSALNRHQRTH
ENSOCUP00000024850
C2H2 ZF
604
626
YECYECGKCFSQMSYLTIHHRIH
ENSOCUP00000024850
C2H2 ZF
632
654
FECNECGKAFSRMSYLTVHYRTH
ENSOCUP00000024850
C2H2 ZF
660
682
YECTECGKKFYHKSAFNSHQRIH
Links
Other
C2H2 ZF
family TFs
Other
Oryctolagus cuniculus
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy