CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ZNF248
(
Oryctolagus cuniculus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSOCUG00000009791
T103055_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF248
M07739_2.00
Homo sapiens
NYNTYVMTGRAYATDGKHHDY
RHDDMCHATRTYCAKBRANRN
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF248.RCADE.OriginalMapping
0.824
0.988
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOCUP00000008432
C2H2 ZF
376
398
FECGECGKTFWEKSNLTQHQRTH
ENSOCUP00000008432
C2H2 ZF
404
426
YECAECGKAFCQKPHLTNHQRTH
ENSOCUP00000008432
C2H2 ZF
432
454
YECKQCGKTFCVKSNLTEHQRTH
ENSOCUP00000008432
C2H2 ZF
460
482
YECNVCGKSFCHRSALTVHQRTH
ENSOCUP00000008432
C2H2 ZF
488
510
FICNECGKSFCVKSNLIVHQRTH
ENSOCUP00000008432
C2H2 ZF
516
538
YKCNECGKTFCEKSALTKHQRTH
ENSOCUP00000008432
C2H2 ZF
544
566
YECNACGKTFSQRSVLTKHQRIH
Links
Other
C2H2 ZF
family TFs
Other
Oryctolagus cuniculus
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy