ZNF18 (Oryctolagus cuniculus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSOCUG00000010095 T103060_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF18
M08316_2.00
Homo sapiens
NSNRTTCACACY

RGTGTGAAYNSN
ChIP-seq
Schmitges et al.(2016)
P17022.MEME
0.817 0.982
ZNF18
M07602_2.00
Homo sapiens
RGTGTGARBNBNNNN

NNNNVNVYTCACACY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF18.ChIP-seq.ReprocessedData
0.817 0.982
ZNF18
M08901_2.00
Homo sapiens
NVDVTTCACACY

RGTGTGAABHBN
Misc
Kulakovskiy et al.(2013)
ZNF18_HUMAN.H11MO.0.C
0.817 0.982
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOCUP00000008697 C2H2 ZF 473 494
ENSOCUP00000008697 C2H2 ZF 500 522
ENSOCUP00000008697 C2H2 ZF 528 550
ENSOCUP00000008697 C2H2 ZF 556 578
ENSOCUP00000008697 C2H2 ZF 584 606

Links

Other C2H2 ZF family TFs
Other Oryctolagus cuniculus TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSTSYG00000006855 Tarsius syrichta ENSTSYG00000006855 I 0.827
ENSSTOG00000012652 Ictidomys tridecemlineatus ENSSTOG00000012652 I 0.827
ENSPPYG00000007992 Pongo abelii ENSPPYG00000007992 I 0.825
ENSNLEG00000014526 Nomascus leucogenys ENSNLEG00000014526 I 0.825
ZNF18 Callithrix jacchus ENSCJAG00000004790 I 0.825
ZNF18 Pan troglodytes ENSPTRG00000008782 I 0.825
ZNF18 Otolemur garnettii ENSOGAG00000027830 I 0.823
ZNF18 Microcebus murinus ENSMICG00000016196 I 0.821
ZNF18 Tupaia belangeri ENSTBEG00000007103 I 0.820
ZNF18 Erinaceus europaeus ENSEEUG00000011943 I 0.819
ZNF18 Choloepus hoffmanni ENSCHOG00000001767 I 0.818
ZNF18 Pteropus vampyrus ENSPVAG00000014085 I 0.818
ZNF18 Sorex araneus ENSSARG00000003073 I 0.818
ZNF18 Echinops telfairi ENSETEG00000000611 I 0.818
ZNF18 Canis familiaris ENSCAFG00000017843 I 0.818
ZNF18 Dasypus novemcinctus ENSDNOG00000036895 I 0.818
ENSMPUG00000003670 Mustela putorius furo ENSMPUG00000003670 I 0.818
ZNF18 Equus caballus ENSECAG00000025164 I 0.818
ENSAMEG00000013156 Ailuropoda melanoleuca ENSAMEG00000013156 I 0.818
ZNF18 Homo sapiens ENSG00000154957 D 0.817
Zfp18 Rattus norvegicus ENSRNOG00000003981 I 0.814
ENSP00000391376 Macaca fascicularis ENSP00000391376 I 0.813
ENSCSAG00000009126 Chlorocebus sabaeus ENSCSAG00000009126 I 0.813
ENSPANG00000023768 Papio anubis ENSPANG00000023768 I 0.813
Zkscan6 Mus musculus ENSMUSG00000018347 I 0.811
ZNF18 Felis catus ENSFCAG00000027934 I 0.800
Myotis_brandtii_ZNF18_10012803 Myotis brandtii Myotis_brandtii_ZNF18_10012803 N 0.759
ZNF18 Tursiops truncatus ENSTTRG00000012317 N 0.756