CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BCL11A
(
Oryctolagus cuniculus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSOCUG00000023948
T103186_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BCL11A
M07926_2.00
Homo sapiens
BTYTCASTTCCYYHH
DDRRGGAASTGARAV
ChIP-seq
Gerstein et al.(2012)
GM12878_BCL11A_HudsonAlpha
0.827
1.000
BCL11A
M08881_2.00
Homo sapiens
BHBYCABTTCCYBHNYN
NRNDVRGGAAVTGRVDV
Misc
Kulakovskiy et al.(2013)
BC11A_HUMAN.H11MO.0.A
0.827
1.000
BCL11A
M10187_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BCL11A_02
0.827
1.000
BCL11B
M04453_2.00
Homo sapiens
GTGAACGBNDNNVCTACAC
GTGTAGBNNHNVCGTTCAC
SELEX
Yin et al.(2017)
BCL11B_eDBD_HT-SELEX
0.806
0.947
BCL11B
M04454_2.00
Homo sapiens
GTGAACGBNDNHVCTACAC
GTGTAGBDNHNVCGTTCAC
SELEX
Yin et al.(2017)
BCL11B_eDBD_Methyl-HT-SELEX
0.806
0.947
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOCUP00000001042
C2H2 ZF
359
380
SCEFCGKTFKFQSNLVVHRRSH
ENSOCUP00000001042
C2H2 ZF
386
408
YKCNLCDHACTQASKLKRHMKTH
ENSOCUP00000001042
C2H2 ZF
701
723
DTCEYCGKVFKNCSNLTVHRRSH
ENSOCUP00000001042
C2H2 ZF
729
751
YKCELCNYACAQSSKLTRHMKTH
ENSOCUP00000001042
C2H2 ZF
759
782
YKCEICKMPFSVYSTLEKHMKKWH
ENSOCUP00000023517
C2H2 ZF
153
176
YTCTTCKQPFTSAWFLLQHAQNTH
Links
Other
C2H2 ZF
family TFs
Other
Oryctolagus cuniculus
TFs
133 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy