CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSOCUG00000029238
(
Oryctolagus cuniculus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSOCUG00000029238
T103253_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF354B
M07653_2.00
Homo sapiens
RDWTAKYYCMTT
AAKGRRMTAWHY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF354B.RCADE.ReprocessedData
0.817
0.970
ZNF354A
M08331_2.00
Homo sapiens
RTTTARDCCATTTAY
RTAAATGGHYTAAAY
ChIP-seq
Schmitges et al.(2016)
O60765_5-9.RCADE
0.775
0.923
ZNF354A
M07622_2.00
Homo sapiens
RTTTARHCCATTTAC
GTAAATGGDYTAAAY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF354A.RCADE.OriginalMapping
0.775
0.923
ZNF354A
M08914_2.00
Homo sapiens
DTTYHDNYCHTTTMYWTTTADTGW
WCAHTAAAWRKAAADGRNHDRAAH
Misc
Kulakovskiy et al.(2013)
Z354A_HUMAN.H11MO.0.C
0.775
0.923
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOCUP00000026539
C2H2 ZF
220
242
YKCNKCEKAFIHNSSLRKHLKNH
ENSOCUP00000026539
C2H2 ZF
248
270
FKCKECLKAFSQSSALIQHQRTH
ENSOCUP00000026539
C2H2 ZF
276
298
YICKECGKAFSHSASLSKHLRTH
ENSOCUP00000026539
C2H2 ZF
304
326
YRCKECGKSFSRRSGLFIHQKIH
ENSOCUP00000026539
C2H2 ZF
359
381
YLCNECGNTFKSSSSLRYHQRIH
ENSOCUP00000026539
C2H2 ZF
387
409
FKCSECGRAFSQSASLIQHERIH
ENSOCUP00000026539
C2H2 ZF
415
437
YRCNECGKGFTSISRLNRHRIIH
ENSOCUP00000026539
C2H2 ZF
443
465
YTCNECGKALSSHSTLIIHERIH
ENSOCUP00000026539
C2H2 ZF
471
493
CKCKVCGKAFRQSSALIQHQRMH
ENSOCUP00000026539
C2H2 ZF
499
521
YKCNECEKTFRCNSSLSNHQRIH
ENSOCUP00000026539
C2H2 ZF
527
549
YRCEECGMSFGQSAALIQHQRIH
ENSOCUP00000026539
C2H2 ZF
555
577
FKCNTCEKTFRQSSSLIAHQRIH
ENSOCUP00000026539
C2H2 ZF
583
605
YECTACGKLFSQRSSLTNHYKIH
Links
Other
C2H2 ZF
family TFs
Other
Oryctolagus cuniculus
TFs
55 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy