ZNF354A (Oryctolagus cuniculus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSOCUG00000029378 T103275_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF354A
M08331_2.00 		Homo sapiens
RTTTARDCCATTTAY
RTAAATGGHYTAAAY		 ChIP-seq
Schmitges et al.(2016)
O60765_5-9.RCADE 		0.818 0.980
ZNF354A
M07622_2.00 		Homo sapiens
RTTTARHCCATTTAC
GTAAATGGDYTAAAY		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF354A.RCADE.OriginalMapping 		0.818 0.980
ZNF354A
M08914_2.00 		Homo sapiens
DTTYHDNYCHTTTMYWTTTADTGW
WCAHTAAAWRKAAADGRNHDRAAH		 Misc
Kulakovskiy et al.(2013)
Z354A_HUMAN.H11MO.0.C 		0.818 0.980
ZNF354B
M07653_2.00 		Homo sapiens
RDWTAKYYCMTT
AAKGRRMTAWHY		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF354B.RCADE.ReprocessedData 		0.771 0.916
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOCUP00000027080 C2H2 ZF 172 194
ENSOCUP00000027080 C2H2 ZF 200 222
ENSOCUP00000027080 C2H2 ZF 228 250
ENSOCUP00000027080 C2H2 ZF 256 278
ENSOCUP00000027080 C2H2 ZF 312 334
ENSOCUP00000027080 C2H2 ZF 340 362
ENSOCUP00000027080 C2H2 ZF 368 390
ENSOCUP00000027080 C2H2 ZF 396 418
ENSOCUP00000027080 C2H2 ZF 424 446
ENSOCUP00000027080 C2H2 ZF 452 474
ENSOCUP00000027080 C2H2 ZF 480 502
ENSOCUP00000027080 C2H2 ZF 508 530
ENSOCUP00000027080 C2H2 ZF 536 558

Links

Other C2H2 ZF family TFs
Other Oryctolagus cuniculus TFs

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48 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action