CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF180
(
Oryctolagus cuniculus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSOCUG00000029639
T103314_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF180
M07614_2.00
Homo sapiens
CCSCVSBCSCCDCCHNBCCCB
VGGGVNDGGHGGSGVSBGSGG
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF180.RCADE.OriginalMapping
0.756
0.870
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOCUP00000015323
C2H2 ZF
230
252
FECGQCGKAFSWSSHLVAHQRTH
ENSOCUP00000015323
C2H2 ZF
258
280
YACGQCGKAFSRSSHLVSHQRTH
ENSOCUP00000015323
C2H2 ZF
286
308
YRCPQCGKAFSQSYVLVVHQRTH
ENSOCUP00000015323
C2H2 ZF
314
336
YACGQCGKAFRQSYKLTAHQRTH
ENSOCUP00000015323
C2H2 ZF
342
364
YECAQCGKSFIQSYKLIAHQRVH
ENSOCUP00000015323
C2H2 ZF
370
392
YACGQCGKAFSQSYKLVAHQRTH
ENSOCUP00000015323
C2H2 ZF
398
420
FECNECGKSFSWSSQLVAHQRTH
ENSOCUP00000015323
C2H2 ZF
426
448
YACGQCGKSFNRSSHLVMHQRTH
ENSOCUP00000015323
C2H2 ZF
454
476
YACGQCGKAFSQSYVLVVHQRTH
ENSOCUP00000015323
C2H2 ZF
482
504
YACSQCGKAFRQSSCLTQHQRTH
ENSOCUP00000015323
C2H2 ZF
510
532
YACGQCGKTFSLSARLIVHQRTH
ENSOCUP00000015323
C2H2 ZF
538
560
FTCGRCGRAFINSSKLLRHQVTH
Links
Other
C2H2 ZF
family TFs
Other
Oryctolagus cuniculus
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy