CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZFP1
(
Otolemur garnettii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSOGAG00000001902
T103357_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZFP1
M04601_2.00
Homo sapiens
NTWYYATACCYWGCH
DGCWRGGTATRRWAN
SELEX
Yin et al.(2017)
ZFP1_eDBD_HT-SELEX
0.826
0.995
ZFP1
M05854_2.00
Homo sapiens
CCWRCHMAACTAWCC
GGWTAGTTKDGYWGG
SMiLE-seq
Isakova et al.(2017)
ZFP1_1
0.826
0.995
ZFP1
M05855_2.00
Homo sapiens
NTDYBATACCCANHH
DDNTGGGTATVRHAN
SMiLE-seq
Isakova et al.(2017)
ZFP1_2
0.826
0.995
ZFP1
M07670_2.00
Homo sapiens
YNMNTWTTATACCCARCCCWNMTRKCCM
KGGMYAKNWGGGYTGGGTATAAWANKNR
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZFP1.MEME.OriginalMapping
0.826
0.995
ZFP1
M04602_2.00
Homo sapiens
NTWYYATACCYWRCH
DGYWRGGTATRRWAN
SELEX
Yin et al.(2017)
ZFP1_eDBD_Methyl-HT-SELEX
0.826
0.995
Zfp1
M10357_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZFP1_02
0.808
0.957
Zfp1
M10358_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZFP1_03
0.808
0.957
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOGAP00000001694
C2H2 ZF
187
209
FICNYCDKAFSFKSLLISHKRIH
ENSOGAP00000001694
C2H2 ZF
215
237
YECNVCKKTFSHKANLIKHQRIH
ENSOGAP00000001694
C2H2 ZF
243
265
FECPECGKAFTHQSNLIVHQRAH
ENSOGAP00000001694
C2H2 ZF
271
293
YECSECGKTFAQKFELTTHQRIH
ENSOGAP00000001694
C2H2 ZF
299
321
YECNECAKTFFKKSNLIIHQKIH
ENSOGAP00000001694
C2H2 ZF
327
349
YECSECGKSFIQNSQLIIHMRTH
ENSOGAP00000001694
C2H2 ZF
355
377
YECTECGKTFSQRSTLRLHLRIH
ENSOGAP00000001694
C2H2 ZF
383
405
YECSECGKAFSRKSRLSVHQRVH
Links
Other
C2H2 ZF
family TFs
Other
Otolemur garnettii
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy