CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZFP28
(
Otolemur garnettii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSOGAG00000004896
T103406_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZFP28
M08378_2.00
Homo sapiens
DNNHNNHNHDDBMKYTCHDTTTCYTYWDNK
NAYMNHWRARGAAAHDGARMKVHHDNDNND
ChIP-seq
Schmitges et al.(2016)
Q8NHY6_2-12.RCADE
0.821
0.979
ZFP28
M08949_2.00
Homo sapiens
YTCTRTTTCTTCTKRWGTCA
TGACWYMAGAAGAAAYAGAR
Misc
Kulakovskiy et al.(2013)
ZFP28_HUMAN.H11MO.0.C
0.821
0.979
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOGAP00000004370
C2H2 ZF
418
440
FKCNECKKTFTQSSSLTVHQRIH
ENSOGAP00000004370
C2H2 ZF
446
468
YKCNDCGKAFSDGSSFARHQRCH
ENSOGAP00000004370
C2H2 ZF
474
497
YECIECGKAFIQNTSLIRHWRYYH
ENSOGAP00000004370
C2H2 ZF
503
525
FDCIDCGKAFSDHIGLNQHRRIH
ENSOGAP00000004370
C2H2 ZF
531
553
YKCDVCHKSFRYGSSLTVHQRIH
ENSOGAP00000004370
C2H2 ZF
559
581
YECDVCRKAFSHHASLTQHQRVH
ENSOGAP00000004370
C2H2 ZF
587
609
FKCKECGKAFRQNIHLASHLRIH
ENSOGAP00000004370
C2H2 ZF
615
637
FECGECGKSFSISSQLATHQRIH
ENSOGAP00000004370
C2H2 ZF
643
665
YDCKVCSKAFTQKAHLAQHQKTH
ENSOGAP00000004370
C2H2 ZF
671
693
YECKECGKAFSQTTHLIQHQRVH
ENSOGAP00000004370
C2H2 ZF
699
721
YKCMECGKAFGDNSSCTQHQRLH
ENSOGAP00000004370
C2H2 ZF
727
749
YECIECGKAFKTKSSLICHRRSH
ENSOGAP00000004370
C2H2 ZF
755
777
YECSACGKAFSHRQSLSVHQRIH
ENSOGAP00000004370
C2H2 ZF
783
805
YECKECRKTFIQIGHLNQHKRVH
ENSOGAP00000004370
C2H2 ZF
810
833
SCNYKKSRKVFRQTAHLAHHQRIH
Links
Other
C2H2 ZF
family TFs
Other
Otolemur garnettii
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy