PRDM16 (Otolemur garnettii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSOGAG00000005055 T103409_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PRDM16
M10223_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_03
0.823 0.987
PRDM16
M10224_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_04
0.823 0.987
PRDM16
M10225_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_05
0.823 0.987
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOGAP00000004519 C2H2 ZF 209 230
ENSOGAP00000004519 C2H2 ZF 261 283
ENSOGAP00000004519 C2H2 ZF 289 311
ENSOGAP00000004519 C2H2 ZF 317 340
ENSOGAP00000004519 C2H2 ZF 346 368
ENSOGAP00000004519 C2H2 ZF 374 396
ENSOGAP00000004519 C2H2 ZF 403 424
ENSOGAP00000004519 C2H2 ZF 931 953
ENSOGAP00000004519 C2H2 ZF 959 982
ENSOGAP00000004519 C2H2 ZF 988 1010

Links

Other C2H2 ZF family TFs
Other Otolemur garnettii TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PRDM16 Equus caballus ENSECAG00000017045 I 0.826
PRDM16 Loxodonta africana ENSLAFG00000001071 I 0.825
XP_002938538 Xenopus tropicalis XP_002938538 I 0.824
ENSP00000417899-D2 Bos grunniens ENSP00000417899-D2 I 0.824
PRDM16 Bos taurus ENSBTAG00000018965 I 0.824
PRDM16 Gorilla gorilla ENSGGOG00000003763 I 0.823
ENSPPYG00000001968 Pongo abelii ENSPPYG00000001968 I 0.823
ENSPSIG00000004093 Pelodiscus sinensis ENSPSIG00000004093 I 0.823
ENSP00000270722 Macaca fascicularis ENSP00000270722 I 0.823
PRDM16 Macaca mulatta ENSMMUG00000009350 I 0.823
PRDM16 Homo sapiens ENSG00000142611 D 0.823
Alligator_sinensis_CCG011602.1 Alligator sinensis Alligator_sinensis_CCG011602.1 I 0.821
Afo_R003306 Aptenodytes forsteri Afo_R003306 I 0.821
Gfo_R009744 Geospiza fortis Gfo_R009744 I 0.821
ENSGALG00000001063 Gallus gallus ENSGALG00000001063 I 0.821
Brh_R007819 Buceros rhinoceros Brh_R007819 I 0.821
PRDM16 Meleagris gallopavo ENSMGAG00000001857 I 0.821
ENSAPLG00000005898 Anas platyrhynchos ENSAPLG00000005898 I 0.821
PRDM16 Canis familiaris ENSCAFG00000019473 I 0.819
PRDM16 Sus scrofa ENSSSCG00000021490 I 0.818
ENSLOCG00000005336 Lepisosteus oculatus ENSLOCG00000005336 I 0.812
Ogr15306 Ophisaurus gracilis Ogr15306 I 0.800
Aan_R005955 Calypte anna Aan_R005955 I 0.799
ENSFALG00000009580 Ficedula albicollis ENSFALG00000009580 I 0.799
PRDM16 Danio rerio ENSDARG00000078324 I 0.782
ENSGMOG00000015664 Gadus morhua ENSGMOG00000015664 I 0.781
si:ch211-263k4.2 Gasterosteus aculeatus ENSGACG00000006600 I 0.776
si:ch211-263k4.2 Oryzias latipes ENSORLG00000004492 I 0.776
ENSPFOG00000010341 Poecilia formosa ENSPFOG00000010341 I 0.776
ENSXMAG00000019072 Xiphophorus maculatus ENSXMAG00000019072 I 0.776
ENSAMXG00000014024 Astyanax mexicanus ENSAMXG00000014024 I 0.775
ENSONIG00000002121 Oreochromis niloticus ENSONIG00000002121 I 0.771
si:ch211-263k4.2 Tetraodon nigroviridis ENSTNIG00000011975 N 0.757
si:ch211-263k4.2 Takifugu rubripes ENSTRUG00000014772 N 0.757