CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PRDM16
(
Otolemur garnettii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSOGAG00000005055
T103409_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PRDM16
M10223_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_03
0.823
0.987
PRDM16
M10224_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_04
0.823
0.987
PRDM16
M10225_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_05
0.823
0.987
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOGAP00000004519
C2H2 ZF
209
230
FRCDECDELFQSKLDLRRHKKY
ENSOGAP00000004519
C2H2 ZF
261
283
HECKDCERMFPNKYSLEQHMIVH
ENSOGAP00000004519
C2H2 ZF
289
311
YKCDQCPKAFNWKSNLIRHQMSH
ENSOGAP00000004519
C2H2 ZF
317
340
FECENCVKVFTDPSNLQRHIRSQH
ENSOGAP00000004519
C2H2 ZF
346
368
HACPDCGKTFATSSGLKQHKHIH
ENSOGAP00000004519
C2H2 ZF
374
396
FICEVCHKSYTQFSNLCRHKRMH
ENSOGAP00000004519
C2H2 ZF
403
424
IKCKDCGQMFSTTSSLNKHRRF
ENSOGAP00000004519
C2H2 ZF
931
953
YTCRYCGKIFPRSANLTRHLRTH
ENSOGAP00000004519
C2H2 ZF
959
982
YRCKYCDRSFSISSNLQRHVRNIH
ENSOGAP00000004519
C2H2 ZF
988
1010
FKCHLCSRCFGQQTNLDRHLKKH
Links
Other
C2H2 ZF
family TFs
Other
Otolemur garnettii
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy