ZNF354A (Otolemur garnettii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSOGAG00000024624 T103621_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF354A
M08331_2.00
Homo sapiens
RTTTARDCCATTTAY

RTAAATGGHYTAAAY
ChIP-seq
Schmitges et al.(2016)
O60765_5-9.RCADE
0.824 0.983
ZNF354A
M07622_2.00
Homo sapiens
RTTTARHCCATTTAC

GTAAATGGDYTAAAY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF354A.RCADE.OriginalMapping
0.824 0.983
ZNF354A
M08914_2.00
Homo sapiens
DTTYHDNYCHTTTMYWTTTADTGW

WCAHTAAAWRKAAADGRNHDRAAH
Misc
Kulakovskiy et al.(2013)
Z354A_HUMAN.H11MO.0.C
0.824 0.983
ZNF354B
M07653_2.00
Homo sapiens
RDWTAKYYCMTT

AAKGRRMTAWHY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF354B.RCADE.ReprocessedData
0.777 0.923
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOGAP00000015688 C2H2 ZF 215 237
ENSOGAP00000015688 C2H2 ZF 243 265
ENSOGAP00000015688 C2H2 ZF 271 293
ENSOGAP00000015688 C2H2 ZF 299 321
ENSOGAP00000015688 C2H2 ZF 355 377
ENSOGAP00000015688 C2H2 ZF 383 405
ENSOGAP00000015688 C2H2 ZF 411 433
ENSOGAP00000015688 C2H2 ZF 439 461
ENSOGAP00000015688 C2H2 ZF 467 489
ENSOGAP00000015688 C2H2 ZF 495 517
ENSOGAP00000015688 C2H2 ZF 523 545
ENSOGAP00000015688 C2H2 ZF 551 573
ENSOGAP00000015688 C2H2 ZF 579 601

Links

Other C2H2 ZF family TFs
Other Otolemur garnettii TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
nhr-86 Caenorhabditis elegans WBGene00003676 D 0.000
nhr-70 Caenorhabditis elegans WBGene00003660 D 0.000
SMUV_0000886001 Syphacia muris SMUV_0000886001 I 0.000
L892_g10708 Steinernema scapterisci L892_g10708 I 0.000
L889_g987 Steinernema feltiae L889_g987 I 0.000
L889_g9698 Steinernema feltiae L889_g9698 I 0.000
L596_g9106 Steinernema carpocapsae L596_g9106 I 0.000
L596_g27786 Steinernema carpocapsae L596_g27786 I 0.000
EVEC_0001266201 Enterobius vermicularis EVEC_0001266201 I 0.000
nhr-273 Caenorhabditis elegans WBGene00020460 I 0.000
nhr-109 Caenorhabditis elegans WBGene00003699 I 0.000
L892_g8140 Steinernema scapterisci L892_g8140 I 0.000
L892_g8144 Steinernema scapterisci L892_g8144 I 0.000
SMUV_0000801801 Syphacia muris SMUV_0000801801 I 0.000
scaffold260-EXSNAP2012.15 Pristionchus exspectatus scaffold260-EXSNAP2012.15 I 0.000
scaffold183-EXSNAP2012.18 Pristionchus exspectatus scaffold183-EXSNAP2012.18 I 0.000
NECAME_01500 Necator americanus NECAME_01500 I 0.000
L898_g28806 Steinernema monticolum L898_g28806 I 0.000
L898_g10723 Steinernema monticolum L898_g10723 I 0.000
L893_g9517 Steinernema glaseri L893_g9517 I 0.000
L893_g4569 Steinernema glaseri L893_g4569 I 0.000
L893_g2090 Steinernema glaseri L893_g2090 I 0.000
L892_g8145 Steinernema scapterisci L892_g8145 I 0.000
CRE27659 Caenorhabditis remanei CRE27659 I 0.000
nhr-28 Caenorhabditis elegans WBGene00003624 I 0.000
CJA07390 Caenorhabditis japonica CJA07390 I 0.000
CBN24070 Caenorhabditis brenneri CBN24070 I 0.000
CBN16902 Caenorhabditis brenneri CBN16902 I 0.000
CBN04619 Caenorhabditis brenneri CBN04619 I 0.000
CBN03769 Caenorhabditis brenneri CBN03769 I 0.000
CBN03440 Caenorhabditis brenneri CBN03440 I 0.000
CBG20699 Caenorhabditis briggsae CBG20699 I 0.000
CBG16375 Caenorhabditis briggsae CBG16375 I 0.000
CBG12152 Caenorhabditis briggsae CBG12152 I 0.000
CBG03688 Caenorhabditis briggsae CBG03688 I 0.000
CJA10576 Caenorhabditis japonica CJA10576 I 0.000
CRE07801 Caenorhabditis remanei CRE07801 I 0.000
nhr-16 Caenorhabditis elegans WBGene00003615 I 0.000
nhr-12 Caenorhabditis elegans WBGene00003611 I 0.000
PPA10478 Pristionchus pacificus PPA10478 I 0.000
PPA08785 Pristionchus pacificus PPA08785 I 0.000
CRE27174 Caenorhabditis remanei CRE27174 I 0.000
CRE18529 Caenorhabditis remanei CRE18529 I 0.000
CRE17355 Caenorhabditis remanei CRE17355 I 0.000
CRE17354 Caenorhabditis remanei CRE17354 I 0.000
CRE17310 Caenorhabditis remanei CRE17310 I 0.000
CBG03687 Caenorhabditis briggsae CBG03687 I 0.000
BXY_1188800 Bursaphelenchus xylophilus BXY_1188800 N 0.000
RSKR_0000313900 Rhabditophanes kr3021 RSKR_0000313900 N 0.000