ZFP42 (Otolemur garnettii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSOGAG00000027863 T103702_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZFP42
M04581_2.00
Homo sapiens
NGDCVGCCATMTTGN

NCAAKATGGCBGHCN
SELEX
Yin et al.(2017)
ZFP42_eDBD_HT-SELEX
0.782 0.880
ZFP42
M08348_2.00
Homo sapiens
GSMGCCATYTTN

NAARATGGCKSC
ChIP-seq
Schmitges et al.(2016)
Q96MM3_1-4.RCADE
0.782 0.880
ZFP42
M08927_2.00
Homo sapiens
VGSMGCCATYTT

AARATGGCKSCB
Misc
Kulakovskiy et al.(2013)
ZFP42_HUMAN.H11MO.0.A
0.782 0.880
ZFP42
M10278_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$REX1_03
0.782 0.880
ZFP42
M04582_2.00
Homo sapiens
NGGCRGCCATMTTGN

NCAAKATGGCYGCCN
SELEX
Yin et al.(2017)
ZFP42_eDBD_Methyl-HT-SELEX
0.782 0.880
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOGAP00000017058 C2H2 ZF 190 214
ENSOGAP00000017058 C2H2 ZF 219 241
ENSOGAP00000017058 C2H2 ZF 247 271
ENSOGAP00000017058 C2H2 ZF 277 301

Links

Other C2H2 ZF family TFs
Other Otolemur garnettii TFs

9 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ZFP42 Pan troglodytes ENSPTRG00000031054 I 0.794
ZFP42 Gorilla gorilla ENSGGOG00000005953 I 0.794
ENSPPYG00000015262 Pongo abelii ENSPPYG00000015262 I 0.794
ENSNLEG00000018869 Nomascus leucogenys ENSNLEG00000018869 I 0.789
ZFP42 Homo sapiens ENSG00000179059 D 0.782
ENSMICG00000005727 Microcebus murinus ENSMICG00000005727 I 0.777
ENSP00000317686 Macaca fascicularis ENSP00000317686 I 0.772
ENSMMUG00000007018 Macaca mulatta ENSMMUG00000007018 I 0.772
ENSPANG00000013671 Papio anubis ENSPANG00000013671 I 0.772