CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF12
(
Otolemur garnettii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSOGAG00000028373
T103719_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF12
M04515_2.00
Homo sapiens
NVYGCKRTAACAARYAKSMCC
GGKSMTRYTTGTTAYMGCRBN
SELEX
Yin et al.(2017)
ZNF12_eDBD_HT-SELEX
0.826
0.994
ZNF12
M07611_2.00
Homo sapiens
BNYBYSTYNYNGCNGCNS
SNGCNGCNRNRASRVRNV
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF12.RCADE.OriginalMapping
0.826
0.994
ZNF12
M04516_2.00
Homo sapiens
NVYGCWRTAACGAGYABCMCC
GGKGVTRCTCGTTAYWGCRBN
SELEX
Yin et al.(2017)
ZNF12_eDBD_Methyl-HT-SELEX
0.826
0.994
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOGAP00000019202
C2H2 ZF
384
406
YECTQCGKSFCKKSKFIIHQRTH
ENSOGAP00000019202
C2H2 ZF
412
434
YECNQCGKSFCQKGTLTVHQRTH
ENSOGAP00000019202
C2H2 ZF
440
462
YECNECGKNFYQKLHLIQHQRTH
ENSOGAP00000019202
C2H2 ZF
468
490
YECSYCGKSFCQKTHLTQHQRTH
ENSOGAP00000019202
C2H2 ZF
496
518
YVCHDCGKTFSQKSALNDHQKIH
ENSOGAP00000019202
C2H2 ZF
524
546
YKCSECGKCFCRKSTLTTHLRTH
ENSOGAP00000019202
C2H2 ZF
552
574
YECNECGKFFSRLSYLTVHYRTH
ENSOGAP00000019202
C2H2 ZF
580
602
YECNECGKTFYLNSALMRHQRVH
ENSOGAP00000019202
C2H2 ZF
608
630
YECNECGKLFSQLSYLTIHHRTH
ENSOGAP00000019202
C2H2 ZF
636
658
YECSECGKTFYQNSALCRHRRIH
ENSOGAP00000019202
C2H2 ZF
664
686
YECYICGKFFSQMSYLTIHHRIH
ENSOGAP00000019202
C2H2 ZF
692
714
YECSECGKTFCQNSALNRHQRTH
ENSOGAP00000019202
C2H2 ZF
720
742
YECYECGKCFSQMSYLTIHHRIH
ENSOGAP00000019202
C2H2 ZF
748
770
FECNECGKAFSRMSYLTVHYRTH
ENSOGAP00000019202
C2H2 ZF
776
798
YECTECGKKFYHKSAFNSHQRIH
Links
Other
C2H2 ZF
family TFs
Other
Otolemur garnettii
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy