ZNF250 (Otolemur garnettii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSOGAG00000028856 T103738_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF250
M04619_2.00 		Homo sapiens
NYASGCCYAY
RTRGGCSTRN		 SELEX
Yin et al.(2017)
ZNF250_eDBD_HT-SELEX 		0.801 0.936
ZNF250
M08370_2.00 		Homo sapiens
CYYTGCAGB
VCTGCARRG		 ChIP-seq
Schmitges et al.(2016)
P15622_1-3.RCADE 		0.801 0.936
ZNF250
M08944_2.00 		Homo sapiens
TACCATRCTGTTTTGRTTAC
GTAAYCAAAACAGYATGGTA		 Misc
Kulakovskiy et al.(2013)
ZN250_HUMAN.H11MO.0.C 		0.801 0.936
ZNF250
M04620_2.00 		Homo sapiens
NTAGGCCTAN
NTAGGCCTAN		 SELEX
Yin et al.(2017)
ZNF250_eDBD_Methyl-HT-SELEX 		0.801 0.936
ZNF250
M08264_2.00 		Homo sapiens
YVDTGCAHTTTTBNB
VNVAAAADTGCAHBR		 ChIP-seq
Najafabadi et al.(2015b)
ZNF250 		0.801 0.930
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOGAP00000015922 C2H2 ZF 194 216
ENSOGAP00000015922 C2H2 ZF 222 244
ENSOGAP00000015922 C2H2 ZF 250 272
ENSOGAP00000015922 C2H2 ZF 278 300
ENSOGAP00000015922 C2H2 ZF 306 328
ENSOGAP00000015922 C2H2 ZF 336 356
ENSOGAP00000015922 C2H2 ZF 362 384
ENSOGAP00000015922 C2H2 ZF 390 412
ENSOGAP00000015922 C2H2 ZF 418 440
ENSOGAP00000015922 C2H2 ZF 446 468
ENSOGAP00000015922 C2H2 ZF 474 496
ENSOGAP00000015922 C2H2 ZF 502 524
ENSOGAP00000015922 C2H2 ZF 530 552

Links

Other C2H2 ZF family TFs
Other Otolemur garnettii TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Zfp647 Dipodomys ordii ENSDORG00000003353 I 0.807
LOC102555083 Rattus norvegicus ENSRNOG00000050651 I 0.806
Zfp647 Rattus norvegicus ENSRNOG00000050661 I 0.806
Zfp647 Mus musculus ENSMUSG00000054967 I 0.806
ZNF250 Ochotona princeps ENSOPRG00000014807 I 0.805
ENSCSAG00000008192 Chlorocebus sabaeus ENSCSAG00000008192 I 0.801
ENSNLEG00000011038 Nomascus leucogenys ENSNLEG00000011038 I 0.801
ENSPPYG00000018996 Pongo abelii ENSPPYG00000018996 I 0.801
ZNF250 Pan troglodytes ENSPTRG00000023097 I 0.801
ENSMMUP00000031824 Macaca fascicularis ENSMMUP00000031824 I 0.801
ZNF250 Callithrix jacchus ENSCJAG00000021381 I 0.801
ZNF250 Macaca mulatta ENSMMUG00000011548 I 0.801
ENSPANG00000017990 Papio anubis ENSPANG00000017990 I 0.801
ZNF250 Homo sapiens ENSG00000196150 D 0.801
ENSMPUG00000006008 Mustela putorius furo ENSMPUG00000006008 I 0.800
ENSGGOG00000010329 Gorilla gorilla ENSGGOG00000010329 I 0.800
ENSCPOG00000001490 Cavia porcellus ENSCPOG00000001490 I 0.800
ZNF250 Sorex araneus ENSSARG00000004999 I 0.799
ENSAMEG00000005352 Ailuropoda melanoleuca ENSAMEG00000005352 I 0.799
ZNF250 Erinaceus europaeus ENSEEUG00000004809 I 0.799
ZNF250 Procavia capensis ENSPCAG00000000092 I 0.799
ZNF250 Canis familiaris ENSCAFG00000030799 I 0.799
ZNF250 Felis catus ENSFCAG00000013730 I 0.798
Myotis_brandtii_ZNF250_10006488 Myotis brandtii Myotis_brandtii_ZNF250_10006488 I 0.798
ZNF250 Tupaia belangeri ENSTBEG00000003713 I 0.797
ENSSSCG00000027957 Sus scrofa ENSSSCG00000027957 I 0.796
ZNF250 Loxodonta africana ENSLAFG00000016670 I 0.793
ZNF250 Pteropus vampyrus ENSPVAG00000002855 I 0.787
ZNF250 Echinops telfairi ENSETEG00000012126 I 0.787
ZNF250 Tursiops truncatus ENSTTRG00000013860 I 0.782