CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF250
(
Otolemur garnettii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSOGAG00000028856
T103738_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF250
M04619_2.00
Homo sapiens
NYASGCCYAY
RTRGGCSTRN
SELEX
Yin et al.(2017)
ZNF250_eDBD_HT-SELEX
0.801
0.936
ZNF250
M08370_2.00
Homo sapiens
CYYTGCAGB
VCTGCARRG
ChIP-seq
Schmitges et al.(2016)
P15622_1-3.RCADE
0.801
0.936
ZNF250
M08944_2.00
Homo sapiens
TACCATRCTGTTTTGRTTAC
GTAAYCAAAACAGYATGGTA
Misc
Kulakovskiy et al.(2013)
ZN250_HUMAN.H11MO.0.C
0.801
0.936
ZNF250
M04620_2.00
Homo sapiens
NTAGGCCTAN
NTAGGCCTAN
SELEX
Yin et al.(2017)
ZNF250_eDBD_Methyl-HT-SELEX
0.801
0.936
ZNF250
M08264_2.00
Homo sapiens
YVDTGCAHTTTTBNB
VNVAAAADTGCAHBR
ChIP-seq
Najafabadi et al.(2015b)
ZNF250
0.801
0.930
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOGAP00000015922
C2H2 ZF
194
216
YRCMECGKGFGRSSHLLQHQRIH
ENSOGAP00000015922
C2H2 ZF
222
244
YVCGVCGKAFSQSSVLSKHRRIH
ENSOGAP00000015922
C2H2 ZF
250
272
YECDECGKAFRVSSDLAQHHKIH
ENSOGAP00000015922
C2H2 ZF
278
300
HECLECRKTFTQLSHLIQHQRIH
ENSOGAP00000015922
C2H2 ZF
306
328
YVCALCGKAFNHSTVLRSHQRVH
ENSOGAP00000015922
C2H2 ZF
336
356
CPECGKTFSVKRTLLQHQRVH
ENSOGAP00000015922
C2H2 ZF
362
384
YTCGECGKAFSDRSVLIQHHNVH
ENSOGAP00000015922
C2H2 ZF
390
412
YECGACGKTFSHRSTLMNHERIH
ENSOGAP00000015922
C2H2 ZF
418
440
YACYECGKAFVQHSHLIQHQRVH
ENSOGAP00000015922
C2H2 ZF
446
468
YVCGECGHAFSARRSLVQHERIH
ENSOGAP00000015922
C2H2 ZF
474
496
FPCAQCGKAFSLKATLIVHLRTH
ENSOGAP00000015922
C2H2 ZF
502
524
YECSSCGKAFSQYSVLIQHQRIH
ENSOGAP00000015922
C2H2 ZF
530
552
YECAQCGRAFNQHGHLIQHQKVH
Links
Other
C2H2 ZF
family TFs
Other
Otolemur garnettii
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy