CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSONIG00000006787
(
Oreochromis niloticus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSONIG00000006787
T104046_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZIC5
M04471_2.00
Homo sapiens
NKACCCCCCGCTGHGH
DCDCAGCGGGGGGTMN
SELEX
Yin et al.(2017)
ZIC5_eDBD_HT-SELEX
0.816
0.955
ZIC5
M04472_2.00
Homo sapiens
NKACCCCCYGCTGTGM
KCACAGCRGGGGGTMN
SELEX
Yin et al.(2017)
ZIC5_eDBD_Methyl-HT-SELEX
0.816
0.955
Zic5
M00780_2.00
Mus musculus
BRCCCCCYDS
SHRGGGGGYV
PBM
Weirauch et al.(2013)
pTH2818
0.806
0.945
Zic3
M00151_2.00
Mus musculus
NCMYVBNRNB
VNYNVBRKGN
PBM
Badis et al.(2009)
Zic3_3119
0.763
0.882
ZIC3
M02894_2.00
Homo sapiens
BACCCCCYGCKGYGH
DCRCMGCRGGGGGTV
SELEX
Jolma et al.(2013)
ZIC3_1
0.763
0.882
Zic3
M02936_2.00
Mus musculus
KRCCCCCYGCTGYGH
DCRCAGCRGGGGGYM
SELEX
Jolma et al.(2013)
Zic3_1
0.763
0.882
ZIC3
M04491_2.00
Homo sapiens
VGACCCCCYGCTGTGM
KCACAGCRGGGGGTCB
SELEX
Yin et al.(2017)
ZIC3_eDBD_HT-SELEX
0.763
0.882
ZIC3
M04493_2.00
Homo sapiens
BACCCCCYGCTGYGH
DCRCAGCRGGGGGTV
SELEX
Yin et al.(2017)
ZIC3_FL_HT-SELEX
0.763
0.882
ZIC3
M08902_2.00
Homo sapiens
NVVYHCCTGCTGDGN
NCHCAGCAGGDRBBN
Misc
Kulakovskiy et al.(2013)
ZIC3_HUMAN.H11MO.0.B
0.763
0.882
Zic3
M09013_2.00
Mus musculus
NVVYHCCTGCTGDGN
NCHCAGCAGGDRBBN
Misc
Kulakovskiy et al.(2013)
ZIC3_MOUSE.H11MO.0.A
0.763
0.882
ZIC3
M10229_2.00
Homo sapiens
VRBCMCCCN
NGGGKGVYB
Transfac
Matys et al.(2006)
V$ZIC3_01
0.763
0.882
Zic3
M10359_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZIC3_07
0.763
0.882
ZIC3
M04492_2.00
Homo sapiens
NKACCCCCTGCTGTGM
KCACAGCAGGGGGTMN
SELEX
Yin et al.(2017)
ZIC3_eDBD_Methyl-HT-SELEX
0.763
0.882
ZIC3
M04494_2.00
Homo sapiens
BRCCCCCTGCTGTGM
KCACAGCAGGGGGYV
SELEX
Yin et al.(2017)
ZIC3_FL_Methyl-HT-SELEX
0.763
0.882
Zic1
M00137_2.00
Mus musculus
NCMYVBNGNK
MNCNVBRKGN
PBM
Badis et al.(2009)
Zic1_0991
0.760
0.909
ZIC1
M02893_2.00
Homo sapiens
KRCCCCCYGCTGYG
CRCAGCRGGGGGYM
SELEX
Jolma et al.(2013)
ZIC1_1
0.760
0.909
ZIC1
M04485_2.00
Homo sapiens
BVCCMCCYGYHGYGH
DCRCDRCRGGKGGBV
SELEX
Yin et al.(2017)
ZIC1_eDBD_HT-SELEX
0.760
0.909
ZIC1
M04487_2.00
Homo sapiens
BVCCCCCYGCTGYGH
DCRCAGCRGGGGGBV
SELEX
Yin et al.(2017)
ZIC1_FL_HT-SELEX
0.760
0.909
ZIC1
M08900_2.00
Homo sapiens
BMSCHCCCM
KGGGDGSKV
Misc
Kulakovskiy et al.(2013)
ZIC1_HUMAN.H11MO.0.B
0.760
0.909
Zic1
M08990_2.00
Mus musculus
BMSCHCCCM
KGGGDGSKV
Misc
Kulakovskiy et al.(2013)
ZIC1_MOUSE.H11MO.0.B
0.760
0.909
ZIC1
M10226_2.00
Homo sapiens
KRCNMMCYV
BRGKKNGTM
Transfac
Matys et al.(2006)
V$ZIC1_01
0.760
0.909
ZIC1
M10227_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZIC1_Q2
0.760
0.909
ZIC1
M04486_2.00
Homo sapiens
BACCCCCYRCTGTGM
KCACAGYRGGGGGTV
SELEX
Yin et al.(2017)
ZIC1_eDBD_Methyl-HT-SELEX
0.760
0.909
ZIC1
M04488_2.00
Homo sapiens
BRCCCCCTGCTGTGH
DCACAGCAGGGGGYV
SELEX
Yin et al.(2017)
ZIC1_FL_Methyl-HT-SELEX
0.760
0.909
Zic2
M00150_2.00
Mus musculus
NCMYVYNRNN
NNYNRBRKGN
PBM
Badis et al.(2009)
Zic2_2895
0.756
0.900
ZIC2
M08233_2.00
Homo sapiens
BBCCTGCWGNB
VNCWGCAGGVV
ChIP-seq
Najafabadi et al.(2015b)
ZIC2
0.756
0.900
Zic2
M09011_2.00
Mus musculus
NRMYHCCTGCTGDGH
DCHCAGCAGGDRKYN
Misc
Kulakovskiy et al.(2013)
ZIC2_MOUSE.H11MO.0.C
0.756
0.900
ZIC2
M10107_2.00
Homo sapiens
VACCMCCCH
DGGGKGGTB
Transfac
Matys et al.(2006)
V$ZIC2_01
0.756
0.900
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSONIP00000008566
C2H2 ZF
262
280
CSKTYSTMHELVNHVTVEH
ENSONIP00000008566
C2H2 ZF
289
316
HVCFWEECPREGKAFKAKYKLINHIRVH
ENSONIP00000008566
C2H2 ZF
322
346
FPCPFPGCGKVFARSENLKIHKRTH
ENSONIP00000008566
C2H2 ZF
352
376
FKCEFDGCDRKFANSSDRKKHSHVH
ENSONIP00000008566
C2H2 ZF
382
406
YYCKVRGCDKSYTHPSSLRKHMKVH
Links
Other
C2H2 ZF
family TFs
Other
Oreochromis niloticus
TFs
188 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSXMAG00000010996
Xiphophorus maculatus
ENSXMAG00000010996
I
0.827
zic5
Oryzias latipes
ENSORLG00000011124
I
0.827
ENSPFOG00000012158
Poecilia formosa
ENSPFOG00000012158
I
0.827
ENSLOCG00000003087
Lepisosteus oculatus
ENSLOCG00000003087
I
0.822
ENSAMXG00000002323
Astyanax mexicanus
ENSAMXG00000002323
I
0.822
zic5
Takifugu rubripes
ENSTRUG00000011797
I
0.818
zic5
Tetraodon nigroviridis
ENSTNIG00000014980
I
0.818
ENSSTOG00000027399
Ictidomys tridecemlineatus
ENSSTOG00000027399
I
0.816
ENSPTRG00000034285
Pan troglodytes
ENSPTRG00000034285
I
0.816
ENSCJAG00000020987
Callithrix jacchus
ENSCJAG00000020987
I
0.816
Zic5
Rattus norvegicus
ENSRNOG00000014358
I
0.816
ZIC5
Gorilla gorilla
ENSGGOG00000022385
I
0.816
ZIC5
Homo sapiens
ENSG00000139800
D
0.816
ZIC5
Macaca mulatta
ENSMMUG00000014821
I
0.816
ENSCSAG00000017495
Chlorocebus sabaeus
ENSCSAG00000017495
I
0.816
ZIC5
Dasypus novemcinctus
ENSDNOG00000046390
I
0.816
ENSPSIG00000009089
Pelodiscus sinensis
ENSPSIG00000009089
I
0.816
ENSNLEG00000007807
Nomascus leucogenys
ENSNLEG00000007807
I
0.816
ENSOARG00000004385
Ovis aries
ENSOARG00000004385
I
0.816
ENSPANG00000018055
Papio anubis
ENSPANG00000018055
I
0.816
ZIC5
Canis familiaris
ENSCAFG00000005834
I
0.816
ENSAMEG00000004500
Ailuropoda melanoleuca
ENSAMEG00000004500
I
0.816
ZIC5
Procavia capensis
ENSPCAG00000011845
I
0.816
ZIC5
Erinaceus europaeus
ENSEEUG00000002965
I
0.815
ZIC5
Monodelphis domestica
ENSMODG00000007733
I
0.814
ENSMEUG00000004592
Macropus eugenii
ENSMEUG00000004592
I
0.814
Pvit_14046
Pogona vitticeps
Pvit_14046
I
0.814
zic5
Danio rerio
ENSDARG00000016022
I
0.812
zic5
Xenopus tropicalis
XB-GENE-480775
I
0.810
zic5.S
Xenopus laevis
XB-GENE-865408
I
0.797
CGI_10016116
Crassostrea gigas
CGI_10016116
I
0.779
ENSECAG00000013406
Equus caballus
ENSECAG00000013406
I
0.778
ENSAMXG00000010941
Astyanax mexicanus
ENSAMXG00000010941
I
0.777
zic4
Tetraodon nigroviridis
ENSTNIG00000012759
I
0.768
ENSPFOG00000014007
Poecilia formosa
ENSPFOG00000014007
I
0.768
ENSGMOG00000001798
Gadus morhua
ENSGMOG00000001798
I
0.768
zic4
Oryzias latipes
ENSORLG00000010055
I
0.768
ENSONIG00000005878
Oreochromis niloticus
ENSONIG00000005878
I
0.768
zic4
Gasterosteus aculeatus
ENSGACG00000003685
I
0.768
zic4
Takifugu rubripes
ENSTRUG00000017765
I
0.768
zic4
Danio rerio
ENSDARG00000031307
I
0.768
ENSXMAG00000009162
Xiphophorus maculatus
ENSXMAG00000009162
I
0.768
ENSONIG00000005875
Oreochromis niloticus
ENSONIG00000005875
I
0.767
ENSPFOG00000013981
Poecilia formosa
ENSPFOG00000013981
I
0.767
zic1.S
Xenopus laevis
XB-GENE-864815
I
0.766
zic1
Oryzias latipes
ENSORLG00000010050
I
0.765
ENSLOCG00000007717
Lepisosteus oculatus
ENSLOCG00000007717
I
0.765
SMAR005380
Strigamia maritima
SMAR005380
I
0.764
estExt_gwp.C_400285
Branchiostoma floridae
estExt_gwp.C_400285
I
0.764
ENSAPLG00000003027
Anas platyrhynchos
ENSAPLG00000003027
I
0.764
ENSP00000287538-D1
Bos grunniens
ENSP00000287538-D1
I
0.763
ENSMPUG00000001786
Mustela putorius furo
ENSMPUG00000001786
I
0.763
zic4.L
Xenopus laevis
XB-GENE-1033019
I
0.763
ZIC3
Equus caballus
ENSECAG00000013318
I
0.763
ZIC3
Myotis lucifugus
ENSMLUG00000011691
I
0.763
ZIC3
Canis familiaris
ENSCAFG00000018979
I
0.763
ENSPPYG00000020775
Pongo abelii
ENSPPYG00000020775
I
0.763
ZIC3
Callithrix jacchus
ENSCJAG00000013792
I
0.763
ENSAMEG00000002684
Ailuropoda melanoleuca
ENSAMEG00000002684
I
0.763
SPU_030070
Strongylocentrotus purpuratus
SPU_030070
I
0.763
Zic3
Mus musculus
ENSMUSG00000067860
D
0.763
ZIC3
Oryctolagus cuniculus
ENSOCUG00000009358
I
0.763
ZIC4
Otolemur garnettii
ENSOGAG00000007463
I
0.763
ZIC3
Otolemur garnettii
ENSOGAG00000011700
I
0.763
Alligator_sinensis_CCG012205.1
Alligator sinensis
Alligator_sinensis_CCG012205.1
I
0.763
ENSOARG00000010774
Ovis aries
ENSOARG00000010774
I
0.763
ENSTSYG00000003356
Tarsius syrichta
ENSTSYG00000003356
I
0.763
ENSMEUG00000009632
Macropus eugenii
ENSMEUG00000009632
I
0.763
ENSNLEG00000003005
Nomascus leucogenys
ENSNLEG00000003005
I
0.763
ZIC3
Bos taurus
ENSBTAG00000021413
I
0.763
ENSPANG00000011357
Papio anubis
ENSPANG00000011357
I
0.763
ENSMICG00000010339
Microcebus murinus
ENSMICG00000010339
I
0.763
ENSFALG00000007091
Ficedula albicollis
ENSFALG00000007091
I
0.763
SPU_028583
Strongylocentrotus purpuratus
SPU_028583
I
0.763
ENSSTOG00000024153
Ictidomys tridecemlineatus
ENSSTOG00000024153
I
0.763
Myotis_brandtii_ZIC3_10005513
Myotis brandtii
Myotis_brandtii_ZIC3_10005513
I
0.763
ZIC3
Gorilla gorilla
ENSGGOG00000011914
I
0.763
ENSSHAG00000015091
Sarcophilus harrisii
ENSSHAG00000015091
I
0.763
ZIC3
Echinops telfairi
ENSETEG00000018846
I
0.763
ZIC3
Homo sapiens
ENSG00000156925
D
0.763
ZIC3
Sus scrofa
ENSSSCG00000012705
I
0.763
ENSCPOG00000002374
Cavia porcellus
ENSCPOG00000002374
I
0.763
Ogr15027
Ophisaurus gracilis
Ogr15027
I
0.763
ZIC3
Felis catus
ENSFCAG00000025684
I
0.763
ENSDORG00000014318
Dipodomys ordii
ENSDORG00000014318
I
0.763
Zic3
Rattus norvegicus
ENSRNOG00000000861
I
0.763
zic4
Xenopus tropicalis
XB-GENE-1033015
I
0.763
ZIC3
Pteropus vampyrus
ENSPVAG00000011652
I
0.763
ENSP00000287538
Macaca fascicularis
ENSP00000287538
I
0.763
ZIC3
Loxodonta africana
ENSLAFG00000007048
I
0.763
Pvit_01478
Pogona vitticeps
Pvit_01478
I
0.763
ENSCSAG00000007453
Chlorocebus sabaeus
ENSCSAG00000007453
I
0.763
ZIC3
Dasypus novemcinctus
ENSDNOG00000006192
I
0.763
zic2b
Tetraodon nigroviridis
ENSTNIG00000014979
I
0.762
ENSPSIG00000004881
Pelodiscus sinensis
ENSPSIG00000004881
I
0.761
ENSGMOG00000019585
Gadus morhua
ENSGMOG00000019585
I
0.761
ENSMODG00000021250
Monodelphis domestica
ENSMODG00000021250
I
0.761
ENSPANG00000005804
Papio anubis
ENSPANG00000005804
I
0.760
Alligator_sinensis_CCG012204.1
Alligator sinensis
Alligator_sinensis_CCG012204.1
I
0.760
ZIC1
Taeniopygia guttata
ENSTGUG00000008838
I
0.760
ZIC1
Sus scrofa
ENSSSCG00000011692
I
0.760
zic1
Takifugu rubripes
ENSTRUG00000017760
I
0.760
Zic1
Rattus norvegicus
ENSRNOG00000014644
I
0.760
ZIC1
Pan troglodytes
ENSPTRG00000015501
I
0.760
ENSPSIG00000005002
Pelodiscus sinensis
ENSPSIG00000005002
I
0.760
Aan_R013349
Calypte anna
Aan_R013349
I
0.760
LotgiG193238
Lottia gigantea
LotgiG193238
I
0.760
ENSSTOG00000000952
Ictidomys tridecemlineatus
ENSSTOG00000000952
I
0.760
ZIC1
Tursiops truncatus
ENSTTRG00000014350
I
0.760
ZIC1
Macaca mulatta
ENSMMUG00000004742
I
0.760
ZIC1
Homo sapiens
ENSG00000152977
D
0.760
ZIC1
Felis catus
ENSFCAG00000007061
I
0.760
ENSFALG00000007094
Ficedula albicollis
ENSFALG00000007094
I
0.760
zic1
Gasterosteus aculeatus
ENSGACG00000003678
I
0.760
ENSGALG00000006811
Gallus gallus
ENSGALG00000006811
I
0.760
Gfo_R005436
Geospiza fortis
Gfo_R005436
I
0.760
Myotis_brandtii_ZIC1_10009541
Myotis brandtii
Myotis_brandtii_ZIC1_10009541
I
0.760
ZIC1
Gorilla gorilla
ENSGGOG00000001101
I
0.760
Pvit_01479
Pogona vitticeps
Pvit_01479
I
0.760
ZIC1
Dasypus novemcinctus
ENSDNOG00000047101
I
0.760
XP_002937379
Xenopus tropicalis
XP_002937379
I
0.760
ENSAMEG00000002149
Ailuropoda melanoleuca
ENSAMEG00000002149
I
0.760
ZIC1
Anolis carolinensis
ENSACAG00000006947
I
0.760
ENSAMXG00000010931
Astyanax mexicanus
ENSAMXG00000010931
I
0.760
ENSAPLG00000002960
Anas platyrhynchos
ENSAPLG00000002960
I
0.760
zic1
Danio rerio
ENSDARG00000015567
I
0.760
ENSCSAG00000011409
Chlorocebus sabaeus
ENSCSAG00000011409
I
0.760
ZIC1
Callithrix jacchus
ENSCJAG00000001524
I
0.760
ZIC1
Loxodonta africana
ENSLAFG00000030632
I
0.760
ENSGMOG00000001788
Gadus morhua
ENSGMOG00000001788
I
0.760
ENSLOCG00000007706
Lepisosteus oculatus
ENSLOCG00000007706
I
0.760
ENSP00000282928-D1
Bos grunniens
ENSP00000282928-D1
I
0.760
Zic1
Mus musculus
ENSMUSG00000032368
D
0.760
ENSNLEG00000002407
Nomascus leucogenys
ENSNLEG00000002407
I
0.760
ENSP00000282928
Macaca fascicularis
ENSP00000282928
I
0.760
ZIC1
Microcebus murinus
ENSMICG00000014401
I
0.760
Cmyd_10020767
Chelonia mydas
Cmyd_10020767
I
0.760
ZIC1
Otolemur garnettii
ENSOGAG00000007465
I
0.760
ENSOARG00000005434
Ovis aries
ENSOARG00000005434
I
0.760
ENSMPUG00000011764
Mustela putorius furo
ENSMPUG00000011764
I
0.760
CapteG160442
Capitella teleta
CapteG160442
I
0.759
ENSONIG00000002716
Oreochromis niloticus
ENSONIG00000002716
I
0.759
ENSPFOG00000012982
Poecilia formosa
ENSPFOG00000012982
I
0.759
ENSTGUG00000008837
Taeniopygia guttata
ENSTGUG00000008837
I
0.759
ENSLACG00000008525
Latimeria chalumnae
ENSLACG00000008525
I
0.759
zic3
Oryzias latipes
ENSORLG00000001654
I
0.759
ENSXMAG00000013404
Xiphophorus maculatus
ENSXMAG00000013404
I
0.759
ENSONIG00000006788
Oreochromis niloticus
ENSONIG00000006788
I
0.758
ENSXMAG00000009164
Xiphophorus maculatus
ENSXMAG00000009164
I
0.758
L798_08424
Zootermopsis nevadensis
L798_08424
I
0.758
zic2b
Oryzias latipes
ENSORLG00000011117
I
0.758
PHUM303860
Pediculus humanus
PHUM303860
I
0.758
zic1
Tetraodon nigroviridis
ENSTNIG00000012758
I
0.758
Zic4
Mus musculus
ENSMUSG00000036972
I
0.757
Zic4
Rattus norvegicus
ENSRNOG00000014871
I
0.757
zic3
Danio rerio
ENSDARG00000071497
I
0.757
Ogr15030
Ophisaurus gracilis
Ogr15030
I
0.756
ENSBTAP00000035289-D2
Bos grunniens
ENSBTAP00000035289-D2
I
0.756
ENSNLEG00000007808
Nomascus leucogenys
ENSNLEG00000007808
I
0.756
ZIC2
Equus caballus
ENSECAG00000018593
I
0.756
ZIC2
Dasypus novemcinctus
ENSDNOG00000043170
I
0.756
ZIC2
Erinaceus europaeus
ENSEEUG00000013747
I
0.756
ZIC2
Echinops telfairi
ENSETEG00000007329
I
0.756
ZIC2
Homo sapiens
ENSG00000043355
D
0.756
ENSFCAG00000030117
Felis catus
ENSFCAG00000030117
I
0.756
ENSCSAG00000017494
Chlorocebus sabaeus
ENSCSAG00000017494
I
0.756
ZIC2
Cavia porcellus
ENSCPOG00000026926
I
0.756
ZIC1
Bos taurus
ENSBTAG00000014751
I
0.756
ENSAMEG00000004503
Ailuropoda melanoleuca
ENSAMEG00000004503
I
0.756
ZIC2
Bos taurus
ENSBTAG00000025246
I
0.756
ZIC2
Canis familiaris
ENSCAFG00000005835
I
0.756
ZIC2
Callithrix jacchus
ENSCJAG00000020988
I
0.756
ZIC2
Gorilla gorilla
ENSGGOG00000006512
I
0.756
ENSLACG00000014597
Latimeria chalumnae
ENSLACG00000014597
I
0.756
ENSPPYG00000005472
Pongo abelii
ENSPPYG00000005472
I
0.756
ENSPANG00000007601
Papio anubis
ENSPANG00000007601
I
0.756
ZIC2
Pan troglodytes
ENSPTRG00000006000
I
0.756
Zic2
Rattus norvegicus
ENSRNOG00000054879
I
0.756
ENSSTOG00000023178
Ictidomys tridecemlineatus
ENSSTOG00000023178
I
0.756
ZIC2
Sus scrofa
ENSSSCG00000009520
I
0.756
ZIC2
Otolemur garnettii
ENSOGAG00000025901
I
0.756
Zic2
Mus musculus
ENSMUSG00000061524
D
0.756
ZIC2
Microcebus murinus
ENSMICG00000015310
I
0.756
ZIC2
Loxodonta africana
ENSLAFG00000008431
I
0.756
ZIC2
Myotis lucifugus
ENSMLUG00000003412
I
0.756
ZIC2
Macaca mulatta
ENSMMUG00000014822
I
0.756
ENSMPUG00000011375
Mustela putorius furo
ENSMPUG00000011375
I
0.756
ZIC2
Tursiops truncatus
ENSTTRG00000002568
I
0.756