ENSONIG00000010871 (Oreochromis niloticus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSONIG00000010871 T104142_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SP8
M02898_2.00
Homo sapiens
VMCACBCCCMCH

DGKGGGVGTGKB
SELEX
Jolma et al.(2013)
SP8_1
0.797 0.913
SP8
M04517_2.00
Homo sapiens
NMCMCGCCCMYH

DRKGGGCGKGKN
SELEX
Yin et al.(2017)
SP8_eDBD_HT-SELEX
0.797 0.913
SP9
M04645_2.00
Homo sapiens
VMCMCGCCCMYH

DRKGGGCGKGKB
SELEX
Yin et al.(2017)
SP9_eDBD_HT-SELEX
0.797 0.913
SP8
M04518_2.00
Homo sapiens
RHCACGCCCMYH

DRKGGGCGTGDY
SELEX
Yin et al.(2017)
SP8_eDBD_Methyl-HT-SELEX
0.797 0.913
SP9
M04646_2.00
Homo sapiens
RYCACGCCCMYH

DRKGGGCGTGRY
SELEX
Yin et al.(2017)
SP9_eDBD_Methyl-HT-SELEX
0.797 0.913
Sp1
M03682_2.00
Drosophila melanogaster
HNGCCACGCCCARK

MYTGGGCGTGGCND
SELEX
Nitta et al.(2015)
Sp1_1
0.784 0.899
Sp1
M06117_2.00
Drosophila melanogaster
DHYMCGCCCMY

RKGGGCGKRDH
B1H
Zhu et al.(2011)
Sp1_SANGER_5_FBgn0020378
0.784 0.899
Sp1
M06118_2.00
Drosophila melanogaster
NKHHMCGCCCMYNN

NNRKGGGCGKDDMN
B1H
Zhu et al.(2011)
Sp1_SOLEXA_2.5_FBgn0020378
0.784 0.899
Sp7
M09009_2.00
Mus musculus
VHAVCCTRTAATTW

WAATTAYAGGBTDB
Misc
Kulakovskiy et al.(2013)
SP7_MOUSE.H11MO.0.A
0.775 0.884
SP7
M10258_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$OSX_Q3
0.775 0.884
Sp4
M01862_2.00
Mus musculus
NMCGCCCMY

RKGGGCGKN
PBM
Weirauch et al.(2014)
pTH4998
0.768 0.870
Sp4
M00133_2.00
Mus musculus
HMCGCCCMYN

NRKGGGCGKD
PBM
Badis et al.(2009)
Sp4_1011
0.768 0.870
SP4
M02879_2.00
Homo sapiens
NWRGCCACGCCCMCHYN

NRDGKGGGCGTGGCYWN
SELEX
Jolma et al.(2013)
SP4_1
0.768 0.870
Sp4
M05859_2.00
Mus musculus
DGNYMCGCCCHNN

NNDGGGCGKRNCH
SMiLE-seq
Isakova et al.(2017)
SP4
0.768 0.870
SP4
M08296_2.00
Homo sapiens
NNVGCYCCKCCYMYH

DRKRGGMGGRGCBNN
ChIP-seq
Schmitges et al.(2016)
Q02446.MEME
0.768 0.870
SP4
M08873_2.00
Homo sapiens
BYHDKCYCCGCCYYYHBSBB

VVSVDRRRGGCGGRGMHDRV
Misc
Kulakovskiy et al.(2013)
SP4_HUMAN.H11MO.0.A
0.768 0.870
Sp4
M08975_2.00
Mus musculus
BYHDKCYCCGCCYYYHBSBB

VVSVDRRRGGCGGRGMHDRV
Misc
Kulakovskiy et al.(2013)
SP4_MOUSE.H11MO.0.B
0.768 0.870
Sp5
M09016_2.00
Mus musculus
CYCCKCCYHYHBCYYHBYYYHYHB

VDRDRRRVDRRGVDRDRGGMGGRG
Misc
Kulakovskiy et al.(2013)
SP5_MOUSE.H11MO.0.C
0.768 0.870
SP4
M10165_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP4_Q3
0.768 0.870
SP4
M10166_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP4_Q5
0.768 0.870
SP5
M10319_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP5_Q2
0.768 0.870
Spps
M06159_2.00
Drosophila melanogaster
KWDRCCMCGCCCMBH

DVKGGGCGKGGYHWM
B1H
Zhu et al.(2011)
CG5669_SANGER_10_FBgn0039169
0.765 0.826
Spps
M06160_2.00
Drosophila melanogaster
BDDGCCMCGCCCMYN

NRKGGGCGKGGCHHV
B1H
Zhu et al.(2011)
CG5669_SOLEXA_5_FBgn0039169
0.765 0.826
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSONIP00000013676 C2H2 ZF 285 309
ENSONIP00000013676 C2H2 ZF 315 339
ENSONIP00000013676 C2H2 ZF 345 367

Links

Other C2H2 ZF family TFs
Other Oreochromis niloticus TFs

Invalid Input OrderBy

471 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action