ENSONIG00000011060 (Oreochromis niloticus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSONIG00000011060 T104148_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BCL11B
M04453_2.00 		Homo sapiens
GTGAACGBNDNNVCTACAC
GTGTAGBNNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_HT-SELEX 		0.817 0.982
BCL11B
M04454_2.00 		Homo sapiens
GTGAACGBNDNHVCTACAC
GTGTAGBDNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_Methyl-HT-SELEX 		0.817 0.982
BCL11A
M07926_2.00 		Homo sapiens
BTYTCASTTCCYYHH
DDRRGGAASTGARAV		 ChIP-seq
Gerstein et al.(2012)
GM12878_BCL11A_HudsonAlpha 		0.811 0.947
BCL11A
M08881_2.00 		Homo sapiens
BHBYCABTTCCYBHNYN
NRNDVRGGAAVTGRVDV		 Misc
Kulakovskiy et al.(2013)
BC11A_HUMAN.H11MO.0.A 		0.811 0.947
BCL11A
M10187_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL11A_02 		0.811 0.947
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSONIP00000013922 C2H2 ZF 403 424
ENSONIP00000013922 C2H2 ZF 430 452
ENSONIP00000013922 C2H2 ZF 749 771
ENSONIP00000013922 C2H2 ZF 777 799
ENSONIP00000013922 C2H2 ZF 807 830
ENSONIP00000013923 C2H2 ZF 365 386
ENSONIP00000013923 C2H2 ZF 392 414
ENSONIP00000013923 C2H2 ZF 711 733
ENSONIP00000013923 C2H2 ZF 739 761
ENSONIP00000013923 C2H2 ZF 769 792

Links

Other C2H2 ZF family TFs
Other Oreochromis niloticus TFs

Invalid Input OrderBy

129 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action