CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSONIG00000013041
(
Oreochromis niloticus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSONIG00000013041
T104179_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF384
M04451_2.00
Homo sapiens
TTTTBNNNNNNNNNNNNVAAAA
TTTTBNNNNNNNNNNNNVAAAA
SELEX
Yin et al.(2017)
ZNF384_eDBD_HT-SELEX
0.756
0.803
ZNF384
M08306_2.00
Homo sapiens
CTTTTTTTT
AAAAAAAAG
ChIP-seq
Schmitges et al.(2016)
Q8TF68_1-3.RCADE
0.756
0.803
ZNF384
M08090_2.00
Homo sapiens
WTTTTTTTNHNN
NNDNAAAAAAAW
ChIP-seq
Mathelier et al.(2014)
MA1125.1
0.756
0.803
ZNF384
M08888_2.00
Homo sapiens
BVNNBTTTTTSC
GSAAAAAVNNBV
Misc
Kulakovskiy et al.(2013)
ZN384_HUMAN.H11MO.0.C
0.756
0.803
ZNF384
M10209_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CIZ_01
0.756
0.803
ZNF384
M04452_2.00
Homo sapiens
KTTTYHNNNNNNNNNNDRAAAV
BTTTYHNNNNNNNNNNDRAAAM
SELEX
Yin et al.(2017)
ZNF384_eDBD_Methyl-HT-SELEX
0.756
0.803
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSONIP00000016401
C2H2 ZF
233
255
YRCRMCAATFFSKSDMQIHSKSH
ENSONIP00000016401
C2H2 ZF
261
283
HKCPHCAKSFANSSYLAQHIRIH
ENSONIP00000016401
C2H2 ZF
289
310
YTCSYCQKSFRQLSHLQQHSRY
ENSONIP00000016401
C2H2 ZF
321
343
HKCPHCTKSFANSSYLAQHIRIH
ENSONIP00000016401
C2H2 ZF
349
371
YTCSYCEKSFRQLSHLQQHSRIH
ENSONIP00000016401
C2H2 ZF
377
401
YKCSHPGCEKSFTQLSNLQSHRRQH
ENSONIP00000016401
C2H2 ZF
407
429
YKCPNCNKGYIDAASLEVHMSTH
ENSONIP00000016401
C2H2 ZF
437
459
YSCGLCNRTYTSETYLVKHMEKH
Links
Other
C2H2 ZF
family TFs
Other
Oreochromis niloticus
TFs
42 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy