CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSONIG00000013257
(
Oreochromis niloticus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSONIG00000013257
T104183_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Klf8
M00779_2.00
Mus musculus
NNNMCRCCYN
NRGGYGKNNN
PBM
Weirauch et al.(2013)
pTH3086
0.791
0.899
KLF8
M08867_2.00
Homo sapiens
CACMCMCKG
CMGKGKGTG
Misc
Kulakovskiy et al.(2013)
KLF8_HUMAN.H11MO.0.C
0.791
0.899
Klf8
M09000_2.00
Mus musculus
CACMCMCKG
CMGKGKGTG
Misc
Kulakovskiy et al.(2013)
KLF8_MOUSE.H11MO.0.C
0.791
0.899
KLF8
M10147_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$KLF8_Q5_01
0.791
0.899
KLF8
M10148_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$KLF8_Q5
0.791
0.899
CG42741
M06169_2.00
Drosophila melanogaster
RCCACRCCCWHY
RDWGGGYGTGGY
B1H
Zhu et al.(2011)
CG9895_SANGER_10_FBgn0034810
0.781
0.841
CG42741
M06170_2.00
Drosophila melanogaster
VRCCACRCCCH
DGGGYGTGGYB
B1H
Zhu et al.(2011)
CG9895_SOLEXA_5_FBgn0034810
0.781
0.841
klf-3
M00617_2.00
Caenorhabditis elegans
NHMCGCCCH
DGGGCGKDN
PBM
Narasimhan et al.(2015)
pTH9072
0.764
0.710
KLF1
M00226_2.00
Homo sapiens
CMCGCCCM
KGGGCGKG
PBM
Barrera et al.(2016)
KLF1_REF
0.758
0.768
KLF4
M04463_2.00
Homo sapiens
NVCCACRCCCH
DGGGYGTGGBN
SELEX
Yin et al.(2017)
KLF4_eDBD_HT-SELEX
0.758
0.768
KLF4
M08091_2.00
Homo sapiens
MCACACCCWNN
NNWGGGTGTGK
ChIP-seq
Mathelier et al.(2014)
MA0039.3
0.758
0.768
Klf4
M08021_2.00
Mus musculus
VRCCMCRCCCH
DGGGYGKGGYB
ChIP-seq
Chen et al.(2011)
SRP000217_Klf4
0.758
0.768
KLF4
M08243_2.00
Homo sapiens
RCCMCRCCCH
DGGGYGKGGY
ChIP-seq
Najafabadi et al.(2015b)
KLF14
0.758
0.768
KLF1
M08293_2.00
Homo sapiens
NVNNNRCCMCRCCCH
DGGGYGKGGYNNNBN
ChIP-seq
Schmitges et al.(2016)
Q13351.MEME
0.758
0.768
KLF1
M08871_2.00
Homo sapiens
SVNDGCCMCRCCCH
DGGGYGKGGCHNBS
Misc
Kulakovskiy et al.(2013)
KLF1_HUMAN.H11MO.0.A
0.758
0.768
KLF4
M08894_2.00
Homo sapiens
RCCMCRCCCH
DGGGYGKGGY
Misc
Kulakovskiy et al.(2013)
KLF4_HUMAN.H11MO.0.A
0.758
0.768
Klf4
M08964_2.00
Mus musculus
GCCMCRCCCWBYBBN
NVVRVWGGGYGKGGC
Misc
Kulakovskiy et al.(2013)
KLF4_MOUSE.H11MO.0.A
0.758
0.768
KLF1
M10163_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EKLF_Q5_01
0.758
0.768
KLF1
M10164_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EKLF_Q5
0.758
0.768
KLF4
M10217_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GKLF_02
0.758
0.768
KLF4
M10218_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GKLF_Q3_01
0.758
0.768
KLF4
M10219_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GKLF_Q3
0.758
0.768
KLF4
M10220_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GKLF_Q4
0.758
0.768
KLF4
M04464_2.00
Homo sapiens
NVCCMCRCCCN
NGGGYGKGGBN
SELEX
Yin et al.(2017)
KLF4_eDBD_Methyl-HT-SELEX
0.758
0.768
KLF1
M00224_2.00
Homo sapiens
YMCGCCCH
DGGGCGKR
PBM
Barrera et al.(2016)
KLF1_H299Y
0.758
0.754
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSONIP00000016669
C2H2 ZF
337
361
HMCDYEGCKKVYTKSSHLKAHRRIH
ENSONIP00000016669
C2H2 ZF
367
391
YHCTWEGCTWRFARSDELTRHFRKH
ENSONIP00000016669
C2H2 ZF
397
419
FRCTECDRSFSRSDHLSLHRRRH
ENSONIP00000016670
C2H2 ZF
216
240
HMCDYEGCKKVYTKSSHLKAHRRIH
ENSONIP00000016670
C2H2 ZF
246
270
YHCTWEGCTWRFARSDELTRHFRKH
ENSONIP00000016670
C2H2 ZF
276
298
FRCTECDRSFSRSDHLSLHRRRH
Links
Other
C2H2 ZF
family TFs
Other
Oreochromis niloticus
TFs
216 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy