CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSONIG00000016218
(
Oreochromis niloticus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSONIG00000016218
T104249_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Mtf1
M00136_2.00
Mus musculus
CGTGYGCAM
KTGCRCACG
PBM
Badis et al.(2009)
Mtf1_2377
0.807
0.942
MTF1
M02922_2.00
Homo sapiens
GTGCCGTGTGCAAA
TTTGCACACGGCAC
SELEX
Jolma et al.(2013)
MTF1_1
0.807
0.942
MTF1
M04617_2.00
Homo sapiens
NDNDYCGTGTGCAAARN
NYTTTGCACACGRHNHN
SELEX
Yin et al.(2017)
MTF1_eDBD_HT-SELEX
0.807
0.942
MTF1
M08942_2.00
Homo sapiens
MGKVHCGTGYGCADMDB
VHKHTGCRCACGDBMCK
Misc
Kulakovskiy et al.(2013)
MTF1_HUMAN.H11MO.0.C
0.807
0.942
Mtf1
M08981_2.00
Mus musculus
MGKVHCGTGYGCADMDB
VHKHTGCRCACGDBMCK
Misc
Kulakovskiy et al.(2013)
MTF1_MOUSE.H11MO.0.C
0.807
0.942
MTF1
M10308_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MTF1_01
0.807
0.942
MTF1
M10309_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MTF1_02
0.807
0.942
MTF1
M10310_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MTF1_Q4
0.807
0.942
MTF1
M10311_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MTF1_Q5
0.807
0.942
MTF1
M04618_2.00
Homo sapiens
NRNRCCGTGTGCAAARV
BYTTTGCACACGGYNYN
SELEX
Yin et al.(2017)
MTF1_eDBD_Methyl-HT-SELEX
0.807
0.942
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSONIP00000020420
C2H2 ZF
159
183
YQCMFEGCTRTYSTAGNLRTHQKTH
ENSONIP00000020420
C2H2 ZF
189
213
FVCNQQGCGKAFLTSYSLKIHVRVH
ENSONIP00000020420
C2H2 ZF
219
243
FECDVQGCEKAFNTLYRLKAHQRLH
ENSONIP00000020420
C2H2 ZF
248
272
FNCESEGCTKYFTTLSDLRKHIRTH
ENSONIP00000020420
C2H2 ZF
278
302
FRCDHDGCGKAFAASHHLKTHVRTH
ENSONIP00000020420
C2H2 ZF
308
332
FNCPSDGCEKTFSSQYSLKSHIRGH
Links
Other
C2H2 ZF
family TFs
Other
Oreochromis niloticus
TFs
64 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy