CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZFP1
(
Ochotona princeps
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSOPRG00000006123
T104464_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZFP1
M04601_2.00
Homo sapiens
NTWYYATACCYWGCH
DGCWRGGTATRRWAN
SELEX
Yin et al.(2017)
ZFP1_eDBD_HT-SELEX
0.815
0.978
ZFP1
M05854_2.00
Homo sapiens
CCWRCHMAACTAWCC
GGWTAGTTKDGYWGG
SMiLE-seq
Isakova et al.(2017)
ZFP1_1
0.815
0.978
ZFP1
M05855_2.00
Homo sapiens
NTDYBATACCCANHH
DDNTGGGTATVRHAN
SMiLE-seq
Isakova et al.(2017)
ZFP1_2
0.815
0.978
ZFP1
M07670_2.00
Homo sapiens
YNMNTWTTATACCCARCCCWNMTRKCCM
KGGMYAKNWGGGYTGGGTATAAWANKNR
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZFP1.MEME.OriginalMapping
0.815
0.978
ZFP1
M04602_2.00
Homo sapiens
NTWYYATACCYWRCH
DGYWRGGTATRRWAN
SELEX
Yin et al.(2017)
ZFP1_eDBD_Methyl-HT-SELEX
0.815
0.978
Zfp1
M10357_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZFP1_02
0.797
0.946
Zfp1
M10358_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZFP1_03
0.797
0.946
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOPRP00000005615
C2H2 ZF
175
197
FICNYCDKVFSFKSLLISHKRIH
ENSOPRP00000005615
C2H2 ZF
203
225
YECNVCKKTFSHKANLIKHQRIH
ENSOPRP00000005615
C2H2 ZF
231
253
FECPECGKAFTHQSNLIVHQRAH
ENSOPRP00000005615
C2H2 ZF
259
281
YECSECGKTFAQKFELTTHQRIH
ENSOPRP00000005615
C2H2 ZF
287
309
YQCNECAKTFFKKSNLIIHQKIH
ENSOPRP00000005615
C2H2 ZF
315
337
YECSECGKSFIQNSQLIIHMRTH
ENSOPRP00000005615
C2H2 ZF
343
365
YECTECGKTFSQRSTLRLHLRIH
ENSOPRP00000005615
C2H2 ZF
371
393
YECSECGKAFSRKSRLGVHQRVH
Links
Other
C2H2 ZF
family TFs
Other
Ochotona princeps
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy