CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF180
(
Ochotona princeps
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSOPRG00000007216
T104489_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF180
M07614_2.00
Homo sapiens
CCSCVSBCSCCDCCHNBCCCB
VGGGVNDGGHGGSGVSBGSGG
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF180.RCADE.OriginalMapping
0.795
0.949
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOPRP00000006601
C2H2 ZF
299
321
FECNQCGKSFSWSSHLIAHQRIH
ENSOPRP00000006601
C2H2 ZF
327
349
YECSECGKSFSRSSHLVSHQRTH
ENSOPRP00000006601
C2H2 ZF
355
377
YRCNQCGKSFSQSYVLVVHQRTH
ENSOPRP00000006601
C2H2 ZF
383
405
YECSQCGKSFRQSYKLIAHKRTH
ENSOPRP00000006601
C2H2 ZF
411
433
YECSQCGKSFIQSYKLIAHQRIH
ENSOPRP00000006601
C2H2 ZF
439
461
YECTQCGKSFSQSYKLVAHQRTH
ENSOPRP00000006601
C2H2 ZF
467
489
FECNQCGKSFSWSSQLVAHQRTH
ENSOPRP00000006601
C2H2 ZF
495
517
YECSECGKSFNRSSHLVMHQRTH
ENSOPRP00000006601
C2H2 ZF
523
545
YECNQCGKSFSQSYVLVVHQRTH
ENSOPRP00000006601
C2H2 ZF
551
573
YECNQCGKSFRQSSCLTQHQRTH
ENSOPRP00000006601
C2H2 ZF
579
601
YECGQCGKTFSLSARLIVHQRTH
ENSOPRP00000006601
C2H2 ZF
607
629
FTCSQCGKAFMNSSKLIRHQAIH
Links
Other
C2H2 ZF
family TFs
Other
Ochotona princeps
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy