CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF8
(
Ochotona princeps
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSOPRG00000007396
T104495_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF8
M08401_2.00
Homo sapiens
NNBVYGGTAYGYCHHNDH
DHNDDGRCRTACCRBVNN
ChIP-seq
Schmitges et al.(2016)
P17098_1-6.RCADE
0.819
0.993
ZNF8
M07781_2.00
Homo sapiens
RYRTACCRCWKY
RMWGYGGTAYRY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF8.RCADE.OriginalMapping
0.819
0.993
ZNF8
M08961_2.00
Homo sapiens
TCCATTGTATGGATRTACCACA
TGTGGTAYATCCATACAATGGA
Misc
Kulakovskiy et al.(2013)
ZNF8_HUMAN.H11MO.0.C
0.819
0.993
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOPRP00000006770
C2H2 ZF
251
273
YKCTDCGKSFNHNAHLTVHKRIH
ENSOPRP00000006770
C2H2 ZF
279
301
YICKECGKAFSQNSSLVQHERIH
ENSOPRP00000006770
C2H2 ZF
307
329
YKCAECGKSFCHSTHLTVHRRIH
ENSOPRP00000006770
C2H2 ZF
335
357
YECQDCGRAFNQNSSLGRHKRTH
ENSOPRP00000006770
C2H2 ZF
363
385
YTCSVCGKSFSRTTCLFLHLRTH
ENSOPRP00000006770
C2H2 ZF
391
413
YECNHCGKGFRHSSSLAQHQRKH
Links
Other
C2H2 ZF
family TFs
Other
Ochotona princeps
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy