ZNF454 (Ochotona princeps)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSOPRG00000009035 T104521_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF454
M04571_2.00
Homo sapiens
WRGCGCCWGGCGCYW

WRGCGCCWGGCGCYW
SELEX
Yin et al.(2017)
ZNF454_eDBD_HT-SELEX_1
0.811 0.960
ZNF454
M04572_2.00
Homo sapiens
TRGCGCCGGCGCYN

NRGCGCCGGCGCYA
SELEX
Yin et al.(2017)
ZNF454_eDBD_HT-SELEX_2
0.811 0.960
ZNF454
M08346_2.00
Homo sapiens
KVVRNCHNYMRGGGCCNDGDGCCWTTB

VAAWGGCHCHNGGCCCYKRNDGNYBBM
ChIP-seq
Schmitges et al.(2016)
Q8N9F8_4-12.RCADE
0.811 0.960
ZNF454
M08256_2.00
Homo sapiens
GWGCYTT

AARGCWC
ChIP-seq
Najafabadi et al.(2015b)
ZNF454
0.811 0.960
ZNF454
M07651_2.00
Homo sapiens
CRKVVRHCCVYCRGGVCCBVGAGCCNKYB

VRMNGGCTCBVGGBCCYGRBRGDYBBMYG
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF454.MEME.OriginalMapping
0.811 0.960
ZNF454
M04573_2.00
Homo sapiens
WRGCGCCWGGCGCYW

WRGCGCCWGGCGCYW
SELEX
Yin et al.(2017)
ZNF454_eDBD_Methyl-HT-SELEX_1
0.811 0.960
ZNF454
M04574_2.00
Homo sapiens
TRGCGCCGGCGCYN

NRGCGCCGGCGCYA
SELEX
Yin et al.(2017)
ZNF454_eDBD_Methyl-HT-SELEX_2
0.811 0.960
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOPRP00000008255 C2H2 ZF 175 197
ENSOPRP00000008255 C2H2 ZF 214 236
ENSOPRP00000008255 C2H2 ZF 242 264
ENSOPRP00000008255 C2H2 ZF 270 292
ENSOPRP00000008255 C2H2 ZF 298 320
ENSOPRP00000008255 C2H2 ZF 326 348
ENSOPRP00000008255 C2H2 ZF 354 376
ENSOPRP00000008255 C2H2 ZF 382 404
ENSOPRP00000008255 C2H2 ZF 410 432
ENSOPRP00000008255 C2H2 ZF 438 460
ENSOPRP00000008255 C2H2 ZF 466 488
ENSOPRP00000008255 C2H2 ZF 494 516

Links

Other C2H2 ZF family TFs
Other Ochotona princeps TFs

Invalid Input OrderBy

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action