CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLIS3
(
Ochotona princeps
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSOPRG00000011679
T104586_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GLIS1
M02911_2.00
Homo sapiens
MGACCCCCCACGWHGN
NCDWCGTGGGGGGTCK
SELEX
Jolma et al.(2013)
GLIS1_1
0.825
0.956
GLIS1
M04564_2.00
Homo sapiens
BMCCCCCCRCVDHSH
DSDHBGYGGGGGGKV
SELEX
Yin et al.(2017)
GLIS1_eDBD_HT-SELEX
0.825
0.956
GLIS1
M08345_2.00
Homo sapiens
SNSYSYRGGRGGBV
BVCCYCCYRSRSNS
ChIP-seq
Schmitges et al.(2016)
Q8NBF1.MEME
0.825
0.956
GLIS1
M04565_2.00
Homo sapiens
DCWHNGTGGGGGGTV
BACCCCCCACNDWGH
SELEX
Yin et al.(2017)
GLIS1_eDBD_Methyl-HT-SELEX
0.825
0.956
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOPRP00000010652
C2H2 ZF
533
560
FTCFWAGCPRRYKPFNARYKLLIHMRVH
ENSOPRP00000010652
C2H2 ZF
567
590
KCTFEGCKKAFSRLENLKIHLRSH
ENSOPRP00000010652
C2H2 ZF
596
620
YLCQHPGCQKAFSNSSDRAKHQRTH
ENSOPRP00000010652
C2H2 ZF
626
650
YACQIPGCTKRYTDPSSLRKHVKAH
Links
Other
C2H2 ZF
family TFs
Other
Ochotona princeps
TFs
42 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy