ZNF250 (Ochotona princeps)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSOPRG00000014807 T104638_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF250
M04619_2.00 		Homo sapiens
NYASGCCYAY
RTRGGCSTRN		 SELEX
Yin et al.(2017)
ZNF250_eDBD_HT-SELEX 		0.815 0.967
ZNF250
M08370_2.00 		Homo sapiens
CYYTGCAGB
VCTGCARRG		 ChIP-seq
Schmitges et al.(2016)
P15622_1-3.RCADE 		0.815 0.967
ZNF250
M08944_2.00 		Homo sapiens
TACCATRCTGTTTTGRTTAC
GTAAYCAAAACAGYATGGTA		 Misc
Kulakovskiy et al.(2013)
ZN250_HUMAN.H11MO.0.C 		0.815 0.967
ZNF250
M04620_2.00 		Homo sapiens
NTAGGCCTAN
NTAGGCCTAN		 SELEX
Yin et al.(2017)
ZNF250_eDBD_Methyl-HT-SELEX 		0.815 0.967
ZNF250
M08264_2.00 		Homo sapiens
YVDTGCAHTTTTBNB
VNVAAAADTGCAHBR		 ChIP-seq
Najafabadi et al.(2015b)
ZNF250 		0.815 0.967
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOPRP00000013519 C2H2 ZF 178 200
ENSOPRP00000013519 C2H2 ZF 206 228
ENSOPRP00000013519 C2H2 ZF 234 256
ENSOPRP00000013519 C2H2 ZF 262 284
ENSOPRP00000013519 C2H2 ZF 290 312
ENSOPRP00000013519 C2H2 ZF 318 340
ENSOPRP00000013519 C2H2 ZF 346 368
ENSOPRP00000013519 C2H2 ZF 374 396
ENSOPRP00000013519 C2H2 ZF 402 424
ENSOPRP00000013519 C2H2 ZF 430 452
ENSOPRP00000013519 C2H2 ZF 458 480
ENSOPRP00000013519 C2H2 ZF 486 508
ENSOPRP00000013519 C2H2 ZF 514 536

Links

Other C2H2 ZF family TFs
Other Ochotona princeps TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LOC102555083 Rattus norvegicus ENSRNOG00000050651 I 0.816
Zfp647 Rattus norvegicus ENSRNOG00000050661 I 0.816
ZNF250 Pan troglodytes ENSPTRG00000023097 I 0.816
Zfp647 Mus musculus ENSMUSG00000054967 I 0.816
ZNF250 Macaca mulatta ENSMMUG00000011548 I 0.815
ENSCPOG00000001490 Cavia porcellus ENSCPOG00000001490 I 0.815
ENSPPYG00000018996 Pongo abelii ENSPPYG00000018996 I 0.815
ENSPANG00000017990 Papio anubis ENSPANG00000017990 I 0.815
ENSNLEG00000011038 Nomascus leucogenys ENSNLEG00000011038 I 0.815
ENSCSAG00000008192 Chlorocebus sabaeus ENSCSAG00000008192 I 0.815
ZNF250 Homo sapiens ENSG00000196150 D 0.815
ENSMMUP00000031824 Macaca fascicularis ENSMMUP00000031824 I 0.815
ZNF250 Callithrix jacchus ENSCJAG00000021381 I 0.815
Zfp647 Dipodomys ordii ENSDORG00000003353 I 0.814
ENSGGOG00000010329 Gorilla gorilla ENSGGOG00000010329 I 0.814
ZNF250 Tupaia belangeri ENSTBEG00000003713 I 0.813
ZNF250 Sorex araneus ENSSARG00000004999 I 0.805
ZNF250 Otolemur garnettii ENSOGAG00000028856 I 0.805
ZNF250 Erinaceus europaeus ENSEEUG00000004809 I 0.803
ZNF250 Procavia capensis ENSPCAG00000000092 I 0.802
Myotis_brandtii_ZNF250_10006488 Myotis brandtii Myotis_brandtii_ZNF250_10006488 I 0.800
ZNF250 Felis catus ENSFCAG00000013730 I 0.799
ENSMPUG00000006008 Mustela putorius furo ENSMPUG00000006008 I 0.799
ZNF250 Loxodonta africana ENSLAFG00000016670 I 0.799
ZNF250 Canis familiaris ENSCAFG00000030799 I 0.798
ENSAMEG00000005352 Ailuropoda melanoleuca ENSAMEG00000005352 I 0.798
ENSSSCG00000027957 Sus scrofa ENSSSCG00000027957 I 0.797
ZNF250 Echinops telfairi ENSETEG00000012126 I 0.794
ZNF250 Pteropus vampyrus ENSPVAG00000002855 I 0.785
ZNF250 Tursiops truncatus ENSTTRG00000013860 I 0.777
ZNF250 Dasypus novemcinctus ENSDNOG00000037059 I 0.761