CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF354A
(
Ochotona princeps
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSOPRG00000017155
T104673_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF354A
M08331_2.00
Homo sapiens
RTTTARDCCATTTAY
RTAAATGGHYTAAAY
ChIP-seq
Schmitges et al.(2016)
O60765_5-9.RCADE
0.794
0.959
ZNF354A
M07622_2.00
Homo sapiens
RTTTARHCCATTTAC
GTAAATGGDYTAAAY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF354A.RCADE.OriginalMapping
0.794
0.959
ZNF354A
M08914_2.00
Homo sapiens
DTTYHDNYCHTTTMYWTTTADTGW
WCAHTAAAWRKAAADGRNHDRAAH
Misc
Kulakovskiy et al.(2013)
Z354A_HUMAN.H11MO.0.C
0.794
0.959
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOPRP00000015655
C2H2 ZF
204
226
YKCSMCEKTFINTSSLRKHEKNH
ENSOPRP00000015655
C2H2 ZF
232
254
FKCKECSKAFSQNSALIQHQITH
ENSOPRP00000015655
C2H2 ZF
260
282
YVCKECGKAFTLSTSLYKHLRTH
ENSOPRP00000015655
C2H2 ZF
288
310
YRCKECGKAFSRRSGLFIHQKIH
ENSOPRP00000015655
C2H2 ZF
344
365
LCNERGNTFKSSSSLRYHQRIH
ENSOPRP00000015655
C2H2 ZF
371
393
FKCSECGRAFSQSASLIQHERIH
ENSOPRP00000015655
C2H2 ZF
399
421
YRCNECGKGLTSISRLNRHRIIH
ENSOPRP00000015655
C2H2 ZF
427
449
CNCNECGKALSSHSTLIIHERIH
ENSOPRP00000015655
C2H2 ZF
455
477
CKCKVCGKAFRQSSALIQHQRMH
ENSOPRP00000015655
C2H2 ZF
483
505
YKCNECGKTFRCNSSLSNHQRIH
ENSOPRP00000015655
C2H2 ZF
511
533
YRCQECGISFGQSSALIQHRRIH
ENSOPRP00000015655
C2H2 ZF
539
561
FKCNTCGKTFRQSSSRIAHQRIH
ENSOPRP00000015655
C2H2 ZF
567
589
YECNTCGKLFNHKSSLTSHCKIH
Links
Other
C2H2 ZF
family TFs
Other
Ochotona princeps
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy