CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSORLG00000006797
(
Oryzias latipes
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSORLG00000006797
T104798_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZBTB20
M04599_2.00
Homo sapiens
NVYATACRTYVN
NBRAYGTATRBN
SELEX
Yin et al.(2017)
ZBTB20_eDBD_HT-SELEX
0.769
0.957
ZBTB20
M04600_2.00
Homo sapiens
NVYATACRTTNN
NNAAYGTATRBN
SELEX
Yin et al.(2017)
ZBTB20_eDBD_Methyl-HT-SELEX
0.769
0.957
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSORLP00000008537
C2H2 ZF
44
66
YECTLCSKTFTAKQNYVKHMFVH
ENSORLP00000008537
C2H2 ZF
72
94
HQCSICWRSFSLKDYLIKHMVTH
ENSORLP00000008537
C2H2 ZF
100
122
YQCSICNKRFTQKSSLNVHMRLH
ENSORLP00000008537
C2H2 ZF
128
150
YECYVCKKKFSHKTLLERHMALH
ENSORLP00000008537
C2H2 ZF
181
203
YVCSVCPAKFDQMEHFNDHMRMH
Links
Other
C2H2 ZF
family TFs
Other
Oryzias latipes
TFs
52 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy