CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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wt1
(
Oryzias latipes
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSORLG00000012424
T104886_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WT1
M00249_2.00
Homo sapiens
NCYCCCCCVNN
NNBGGGGGRGN
PBM
Barrera et al.(2016)
WT1_REF
0.793
0.924
WT1
M08937_2.00
Homo sapiens
YYYCBBYYCCTCCYYCNCBY
RVGNGRRGGAGGRRVVGRRR
Misc
Kulakovskiy et al.(2013)
WT1_HUMAN.H11MO.0.C
0.793
0.924
Wt1
M08968_2.00
Mus musculus
YYYCBBYYCCTCCYYCNCBY
RVGNGRRGGAGGRRVVGRRR
Misc
Kulakovskiy et al.(2013)
WT1_MOUSE.H11MO.0.B
0.793
0.924
Wt1
M10337_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$WT1_02
0.793
0.924
WT1
M10290_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$WT1_Q4
0.793
0.924
WT1
M10291_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$WT1_Q6_01
0.793
0.924
WT1
M10292_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$WT1_Q6_02
0.793
0.924
WT1
M10293_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$WT1_Q6
0.793
0.924
WT1
M00244_2.00
Homo sapiens
NNNWAMWATATN
NATATWKTWNNN
PBM
Barrera et al.(2016)
WT1_H373Y
0.793
0.913
WT1
M00245_2.00
Homo sapiens
NNNNNNN
NNNNNNN
PBM
Barrera et al.(2016)
WT1_R366C
0.792
0.913
WT1
M00246_2.00
Homo sapiens
NNNNNNN
NNNNNNN
PBM
Barrera et al.(2016)
WT1_R366L
0.792
0.913
WT1
M00247_2.00
Homo sapiens
NWATATDAHNN
NNDTHATATWN
PBM
Barrera et al.(2016)
WT1_R394L
0.792
0.913
WT1
M00248_2.00
Homo sapiens
NNTATTWTATNNN
NNNATAWAATANN
PBM
Barrera et al.(2016)
WT1_R394W
0.792
0.913
WT1
M00243_2.00
Homo sapiens
NNNNNNN
NNNNNNN
PBM
Barrera et al.(2016)
WT1_F392L
0.786
0.913
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSORLP00000015554
C2H2 ZF
328
352
FMCGYPGCNKRYFKLSHLQMHSRKH
ENSORLP00000015554
C2H2 ZF
358
382
YQCEFTDCGRRFSRSDQLKRHQRRH
ENSORLP00000015554
C2H2 ZF
388
410
FECETCQRKFSRSDHLKTHTRTH
ENSORLP00000015554
C2H2 ZF
419
443
FNCRWPNCQKKFARSDELVRHHNMH
ENSORLP00000015558
C2H2 ZF
312
336
FMCGYPGCNKRYFKLSHLQMHSRKH
ENSORLP00000015558
C2H2 ZF
342
366
YQCEFTDCGRRFSRSDQLKRHQRRH
ENSORLP00000015558
C2H2 ZF
372
394
FECETCQRKFSRSDHLKTHTRTH
ENSORLP00000015558
C2H2 ZF
403
427
FNCRWPNCQKKFARSDELVRHHNMH
ENSORLP00000015559
C2H2 ZF
284
308
FMCGYPGCNKRYFKLSHLQMHSRKH
ENSORLP00000015559
C2H2 ZF
314
338
YQCEFTDCGRRFSRSDQLKRHQRRH
ENSORLP00000015559
C2H2 ZF
344
366
FECETCQRKFSRSDHLKTHTRTH
ENSORLP00000015559
C2H2 ZF
375
399
FNCRWPNCQKKFARSDELVRHHNMH
Links
Other
C2H2 ZF
family TFs
Other
Oryzias latipes
TFs
75 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy