CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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zfpm1
(
Oryzias latipes
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSORLG00000013995
T104917_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSORLP00000017541
C2H2 ZF
95
116
FPCKDCGIWFRSERNLQAHLMY
ENSORLP00000017541
C2H2 ZF
145
168
ICPFPQCNKSCPSASSLEIHMRTH
ENSORLP00000017541
C2H2 ZF
174
196
FVCLICLSAFTTKANCERHLKVH
ENSORLP00000017541
C2H2 ZF
203
225
VCHGCGFVSTTRDILYSHLVTSH
ENSORLP00000017541
C2H2 ZF
250
269
TVCGHNSDSPAHLQQHVRTH
Links
Other
C2H2 ZF
family TFs
Other
Oryzias latipes
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSPFOG00000022969
Poecilia formosa
ENSPFOG00000022969
N
0.764
zfpm1
Gasterosteus aculeatus
ENSGACG00000002554
N
0.764
ENSXMAG00000009855
Xiphophorus maculatus
ENSXMAG00000009855
N
0.764
ENSONIG00000010766
Oreochromis niloticus
ENSONIG00000010766
N
0.759